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Assembly Name: Hypothalamus m-wt v1.0

Listing Annotated UniGenes

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hpt_m_wt_v1.0_unigene41 565
• AutoFact
Probable isovaleryl-coa dehydrogenase n=1 Tax=Salmo salar RepID=B5X1A1_SALSA
0.0
• FL-Next
tr=Probable isovaleryl-coa dehydrogenase; Salmo salar (Atlantic salmon).
0.0
• Sma3
None-
Internal
hpt_m_wt_v1.0_unigene44 232
• AutoFact
PREDICTED: dynein light chain 2, cytoplasmic-like isoform 1 n=2 Tax=Ailuropoda melanoleuca RepID=UPI0001DEA5D6
2.0e-12
• FL-Next
tr=dynein light chain 1, cytoplasmic; Salmo salar (Atlantic salmon).
0.0
• Sma3
dynein light chain 2, cytoplasmic
8.797e-14
Putative Complete
hpt_m_wt_v1.0_unigene46 544
• AutoFact
PREDICTED: zinc finger protein ZXDC n=1 Tax=Danio rerio RepID=UPI0000F1E404
3.0e-28
• FL-Next
None-
• Sma3
ZXD family zinc finger C
7.595e-06
coding
hpt_m_wt_v1.0_unigene48 643
• AutoFact
DEAD (asp-glu-ala-asp) box polypeptide 23 n=1 Tax=Danio rerio RepID=Q6P9Z2_DANRE
0.0
• FL-Next
tr=DEAD (asp-glu-ala-asp) box polypeptide 23; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
C-terminus
hpt_m_wt_v1.0_unigene52 518
• AutoFact
Ubiquitin carrier protein n=1 Tax=Anoplopoma fimbria RepID=C3KHL7_ANOFI
1.99993e-41
• FL-Next
tr=Ubiquitin-conjugating enzyme E2 A; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
Zgc:55512
7.905e-06
Putative C-terminus
hpt_m_wt_v1.0_unigene53 614
• AutoFact
rars, MGC86730, wu:fa96g09, zgc:56050, zgc:86730; arginyl-trna synthetase (EC:6.1.1.19); K01887 arginyl-trna synthetase [EC:6.1.1.19]
0.0
• FL-Next
tr=arginyl-trna synthetase, cytoplasmic; Salmo salar (Atlantic salmon).
0.0
• Sma3
arginyl-trna synthetase
3.522e-12
Internal
hpt_m_wt_v1.0_unigene54 414
• AutoFact
Alpha-1B adrenoceptor n=1 Tax=Oncorhynchus mykiss RepID=A6ZIC8_ONCMY
4.0e-37
• FL-Next
tr=Alpha-1B adrenoceptor; Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
0.0
• Sma3
None-
Internal
hpt_m_wt_v1.0_unigene55 546
• AutoFact
wu:fb02a09; zgc:101116 (EC:3.2.1.51); K01206 alpha-L-fucosidase [EC:3.2.1.51]
0.0
• FL-Next
tr=Zgc:101116; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
fucosidase, alpha-L- 2, plasma
1.168e-09
C-terminus
hpt_m_wt_v1.0_unigene66 471
• AutoFact
yippee-like b n=1 Tax=Oryzias latipes RepID=Q65Z53_ORYLA
3.0e-37
• FL-Next
tr=yippee protein; Pagrus major (Red sea bream) (Chrysophrys major).
0.0
• Sma3
yippee-like 5
6.072e-10
C-terminus
hpt_m_wt_v1.0_unigene68 433
• AutoFact
ankyrin repeat domain-containing protein 54 n=3 Tax=Salmo salar RepID=B5X6J7_SALSA
4.0e-38
• FL-Next
tr=ankyrin repeat domain-containing protein 54; Salmo salar (Atlantic salmon).
0.0
• Sma3
ankyrin repeat domain-containing protein 54
2.137e-10
C-terminus
hpt_m_wt_v1.0_unigene71 660
• AutoFact
fgl2, si:ch211-276e22.3, wu:fj83c10, zgc:136619; fibrinogen-like 2
0.0
• FL-Next
tr=Chromosome 19 SCAF15045, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Uncharacterized protein
2.276e-17
Internal
hpt_m_wt_v1.0_unigene73 438
• AutoFact
Cobalamin_bind domain containing protein
0.0
• FL-Next
tr=Chromosome 12 SCAF14999, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Transcobalamin-2
5.195e-11
Internal
hpt_m_wt_v1.0_unigene74 576
• AutoFact
novel protein similar to vertebrate protein phosphatase 2 (formerly 2A), regulatory subunit b'', alpha (ppp2r3a); K11583 protein phosphatase 2 (formerly 2A), regulatory subunit b''
0.0
• FL-Next
tr=Novel protein similar to vertebrate protein phosphatase 2 (formerly 2A), regulatory subunit b'', alpha (ppp2r3a); Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Si:ch211-269e2.2
8.003e-10
C-terminus
hpt_m_wt_v1.0_unigene75 273
• AutoFact
comm domain-containing protein 3 n=1 Tax=Anoplopoma fimbria RepID=C3KK39_ANOFI
1.0e-31
• FL-Next
tr=comm domain-containing protein 3; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
comm domain-containing protein 3
1.879e-28
N-terminus
hpt_m_wt_v1.0_unigene76 531
• AutoFact
HEXB; hexosaminidase B (beta polypeptide); K12373 beta-hexosaminidase [EC:3.2.1.52]
8.0e-32
• FL-Next
tr=beta-hexosaminidase beta chain; Salmo salar (Atlantic salmon).
0.0
• Sma3
hexosaminidase B (beta polypeptide)
2.514e-13
C-terminus
hpt_m_wt_v1.0_unigene77 464
• AutoFact
UPI00016E70F6 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E70F6
2.0e-20
• FL-Next
sp=Surfeit locus protein 6 homolog; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes).
0.0
• Sma3
Surfeit locus protein 6 homolog
1.182e-10
Internal
hpt_m_wt_v1.0_unigene79 257
• AutoFact
Unassigned protein
0.0
• FL-Next
sp=UPF0765 protein C10orf58 homolog; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Redox-regulatory protein FAM213A
1.684e-20
Putative C-terminus
hpt_m_wt_v1.0_unigene80 461
• AutoFact
tmem33, wu:fd16h10, wu:fi11f08, zgc:55931, zgc:77670; transmembrane protein 33
0.0
• FL-Next
tr=transmembrane protein 33; Ictalurus punctatus (Channel catfish).
0.0
• Sma3
transmembrane protein 33
7.755e-21
N-terminus
hpt_m_wt_v1.0_unigene81 443
• AutoFact
eif5, fb37c12, fb54h04, wu:fb37c12, wu:fb54h04, zgc:56606, zgc:77026; eukaryotic translation initiation factor 5; K03262 translation initiation factor eIF-5
0.0
• FL-Next
tr=eukaryotic translation initiation factor 5; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
eukaryotic translation initiation factor 5
8.155e-19
Internal
hpt_m_wt_v1.0_unigene90 424
• AutoFact
carbonic anhydrase XII-like
5.0e-34
• FL-Next
tr=Chromosome undetermined SCAF11462, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
LOC100170522 protein
7.13e-06
Internal


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain