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Assembly Name: Hypothalamus m-wt v1.0

Listing Putative Complete UniGenes

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hpt_m_wt_v1.0_unigene44 232
• AutoFact
PREDICTED: dynein light chain 2, cytoplasmic-like isoform 1 n=2 Tax=Ailuropoda melanoleuca RepID=UPI0001DEA5D6
2.0e-12
• FL-Next
tr=dynein light chain 1, cytoplasmic; Salmo salar (Atlantic salmon).
0.0
• Sma3
dynein light chain 2, cytoplasmic
8.797e-14
Putative Complete
hpt_m_wt_v1.0_unigene153 332
• AutoFact
progranulin n=1 Tax=Paralichthys olivaceus RepID=B9U2J5_PAROL
5.0e-34
• FL-Next
tr=progranulin; Paralichthys olivaceus (Japanese flounder) (Hippoglossus olivaceus).
0.0
• Sma3
progranulin
1.522e-10
Putative Complete
hpt_m_wt_v1.0_unigene519 307
• AutoFact
Cmc1 domain containing protein
2.0e-13
• FL-Next
sp=Uncharacterized protein c16orf61 homolog; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Uncharacterized protein c16orf61 homolog
0.0
Putative Complete
hpt_m_wt_v1.0_unigene698 262
• AutoFact
up-regulated during skeletal muscle growth protein 5 n=1 Tax=Danio rerio RepID=UPI0000F1D459
2.0e-20
• FL-Next
tr=Up-regulated during skeletal muscle growth protein 5; Salmo salar (Atlantic salmon).
0.0
• Sma3
Uncharacterized protein
0.0
Putative Complete
hpt_m_wt_v1.0_unigene710 285
• AutoFact
dna-directed rna polymerases I, II, and iii subunit rpabc5 n=50 Tax=Metazoa RepID=RPAB5_HUMAN
2.0e-22
• FL-Next
tr=dna-directed rna polymerases I, II, and iii subunit rpabc5; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
dna-directed rna polymerases I, II, and iii subunit rpabc5
0.0
Putative Complete
hpt_m_wt_v1.0_unigene766 429
• AutoFact
Unassigned protein
1.0e-18
• FL-Next
tr=Chromosome undetermined scaf10518, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Chromosome undetermined scaf10518, whole genome shotgun sequence
6.2e-07
Putative Complete
hpt_m_wt_v1.0_unigene997 242
• AutoFact
Nucleolar protein family A, member 3 (H/ACA small nucleolar RNPs) n=2 Tax=Xenopus RepID=A4IHX9_XENTR
1.0e-23
• FL-Next
tr=Chromosome undetermined scaf8089, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Chromosome undetermined scaf8089, whole genome shotgun sequence
0.0
Putative Complete
hpt_m_wt_v1.0_unigene1073 192
• AutoFact
None-
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
Putative Complete
hpt_m_wt_v1.0_unigene1335 216
• AutoFact
ornithine decarboxylase antizyme small isoform n=2 Tax=Percomorpha RepID=Q6X3F2_PAROL
2.0e-21
• FL-Next
tr=ornithine decarboxylase antizyme small isoform orf1; Paralichthys olivaceus (Japanese flounder) (Hippoglossus olivaceus).
0.0
• Sma3
ornithine decarboxylase antizyme small isoform orf1
4.34e-06
Putative Complete
hpt_m_wt_v1.0_unigene1399 430
• AutoFact
None-
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
Putative Complete
hpt_m_wt_v1.0_unigene1447 457
• AutoFact
Selenoprotein W2 n=1 Tax=Artemia franciscana RepID=A7L483_ARTSF
4.0e-09
• FL-Next
tr=Selenoprotein W2a; Oreochromis mossambicus (Mozambique tilapia) (Tilapia mossambica).
0.0
• Sma3
None-
Putative Complete
hpt_m_wt_v1.0_unigene1838 547
• AutoFact
cysteine-rich protein 2 n=3 Tax=Percomorpha RepID=C3KH26_ANOFI
2.99878e-43
• FL-Next
tr=cysteine-rich protein 2; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
cysteine-rich protein 1
1.867e-23
Putative Complete
hpt_m_wt_v1.0_unigene1842 324
• AutoFact
dph3 homolog n=3 Tax=Euteleostei RepID=B5XC56_SALSA
5.0e-18
• FL-Next
tr=dph3 homolog; Salmo salar (Atlantic salmon).
0.0
• Sma3
dph3 homolog
0.0
Putative Complete
hpt_m_wt_v1.0_unigene2188 317
• AutoFact
nadh dehydrogenase 1 beta subcomplex subunit 2, mitochondrial n=2 Tax=Anoplopoma fimbria RepID=C3KHE0_ANOFI
4.0e-38
• FL-Next
tr=nadh dehydrogenase 1 beta subcomplex subunit 2, mitochondrial; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
nadh dehydrogenase 1 beta subcomplex subunit 2, mitochondrial
0.0
Putative Complete
hpt_m_wt_v1.0_unigene2354 273
• AutoFact
HC12887 n=7 Tax=Laurasiatheria RepID=A1XQS1_PIG
1.0e-21
• FL-Next
tr=Chromosome undetermined scaf9631, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Chromosome undetermined scaf9631, whole genome shotgun sequence
0.0
Putative Complete
hpt_m_wt_v1.0_unigene2536 300
• AutoFact
PREDICTED: up-regulated during skeletal muscle growth protein 5-like n=1 Tax=Callithrix jacchus RepID=UPI0001D37F6F
3.0e-05
• FL-Next
tr=Chromosome 18 scaf11624, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Chromosome 18 scaf11624, whole genome shotgun sequence
4.34e-06
Putative Complete
hpt_m_wt_v1.0_unigene2857 143
• AutoFact
DUF1180 domain containing protein
7.0e-05
• FL-Next
tr=Chromosome undetermined SCAF10233, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
None-
Putative Complete
hpt_m_wt_v1.0_unigene2916 281
• AutoFact
cytochrome c oxidase polypeptide viib, mitochondrial n=1 Tax=Osmerus mordax RepID=C1BJQ1_OSMMO
8.0e-24
• FL-Next
tr=cytochrome c oxidase polypeptide viib, mitochondrial; Osmerus mordax (Rainbow smelt) (Atherina mordax).
0.0
• Sma3
cytochrome c oxidase polypeptide viib, mitochondrial
0.0
Putative Complete
hpt_m_wt_v1.0_unigene3924 178
• AutoFact
6.8 kda mitochondrial proteolipid n=1 Tax=Esox lucius RepID=C1BWM9_ESOLU
1.0e-09
• FL-Next
tr=6.8 kda mitochondrial proteolipid; Esox lucius (Northern pike).
0.0
• Sma3
None-
Putative Complete
hpt_m_wt_v1.0_unigene3940 187
• AutoFact
Unassigned protein
4.0e-07
• FL-Next
tr=Uncharacterized protein; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
None-
Putative Complete


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain