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Assembly Name: Hypothalamus m-wt v1.0

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hpt_m_wt_v1.0_unigene1 456
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hpt_m_wt_v1.0_unigene2 645
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hpt_m_wt_v1.0_unigene3 593
• AutoFact
rab3gap1, KIAA0066, fj56a04, rab3gap, wu:fj56a04, zgc:152826; rab3 gtpase activating protein subunit 1
5.0e-34
• FL-Next
sp=rab3 gtpase-activating protein catalytic subunit; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
rab3 gtpase-activating protein catalytic subunit
2.696e-11
C-terminus
hpt_m_wt_v1.0_unigene4 816
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hpt_m_wt_v1.0_unigene5 946
• AutoFact
Protein FRG1 n=4 Tax=Tetraodontidae RepID=FRG1_TAKRU
0.0
• FL-Next
tr=Chromosome 18 scaf14485, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Chromosome 18 scaf14485, whole genome shotgun sequence
0.0
Complete
hpt_m_wt_v1.0_unigene6 588
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hpt_m_wt_v1.0_unigene7 605
• AutoFact
PRMT5 n=1 Tax=Oryzias latipes RepID=B1A4A0_ORYLA
0.0
• FL-Next
tr=PRMT5; Oryzias latipes (Medaka fish) (Japanese ricefish).
0.0
• Sma3
Protein arginine methyltransferase 5
2.906e-10
C-terminus
hpt_m_wt_v1.0_unigene8 522
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hpt_m_wt_v1.0_unigene9 575
• AutoFact
retinol dehydrogenase 10 (all-trans), isoform CRA_a [Rattus norvegicus]
1.0e-32
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
retinol dehydrogenase 10-A
1.112e-14
C-terminus
hpt_m_wt_v1.0_unigene10 576
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hpt_m_wt_v1.0_unigene11 617
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hpt_m_wt_v1.0_unigene12 738
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
putative_coding
hpt_m_wt_v1.0_unigene13 581
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
coding
hpt_m_wt_v1.0_unigene14 637
• AutoFact
Zgc:92790 n=10 Tax=Clupeocephala RepID=Q6DGS5_DANRE
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Chromosome undetermined SCAF14653, whole genome shotgun sequence
0.0
Complete
hpt_m_wt_v1.0_unigene15 484
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hpt_m_wt_v1.0_unigene16 546
• AutoFact
similar to transcription factor 20
4.0e-06
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
Internal
hpt_m_wt_v1.0_unigene17 763
• AutoFact
B-cell receptor-associated protein 31 n=2 Tax=Euteleostei RepID=B5X317_SALSA
0.0
• FL-Next
tr=B-cell receptor-associated protein 31; Salmo salar (Atlantic salmon).
0.0
• Sma3
B-cell receptor-associated protein 31
1.073e-18
C-terminus
hpt_m_wt_v1.0_unigene18 606
• AutoFact
transaldolase n=2 Tax=Protacanthopterygii RepID=C1BIU7_OSMMO
0.0
• FL-Next
sp=transaldolase; Osmerus mordax (Rainbow smelt) (Atherina mordax).
0.0
• Sma3
transaldolase
0.0
C-terminus
hpt_m_wt_v1.0_unigene19 356
• AutoFact
MGC112414; zgc:112414 (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3]
0.0
• FL-Next
tr=phosphoserine phosphatase; Osmerus mordax (Rainbow smelt) (Atherina mordax).
0.0
• Sma3
phosphoserine phosphatase
1.096e-19
C-terminus
hpt_m_wt_v1.0_unigene20 679
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain