SoleaDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: Solea senegalensis v3.0 (global assembly)

UniGene Name: solea_v3.0_unigene54

Length: 157 nt

UniGene Fasta

>solea_v3.0_unigene54
CAGTGGTATGATAGAGCCCGTGTTGAACGCGGTCTCCCTACATCAGATAAAGAAACACAGTAAGCTTACGCTCCTACAGTACTTTGAGCACGAGTTTGGGCCGCAGAATAGCGAAGAATTTCTCACGGCCCAGAAAAACTTTGTTCAGAGTTGTGCT

Ace file of the UniGene solea_v3.0_unigene54

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Annotations

Source	Descriptions	Term	Type	e value	Identity
FL-Next	tr=Uncharacterized protein; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes).	-	-	0.0	73%
Sma3	PtdIns 4-kinase beta	-	-	8.373e-15	-
AutoFact	PREDICTED: catalytic phosphatidylinositol 4-kinase beta-like, partial n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CB97A0	-	-	2.0e-15	71%

Source	ECs	Term	Type	e value	Identity
Sma3	1-phosphatidylinositol 4-kinase	EC:2.7.1.67	-	1.005e-12	-

Source	KEGGs	Term	e value	Identity
Sma3	Inositol phosphate metabolism	00562	1.005e-12	%
Sma3	Metabolic pathways	01100	1.005e-12	%
Sma3	Phosphatidylinositol signaling system	04070	1.005e-12	%

Source	Gene names
Sma3	PI4KB; pi4kb; pik4cb;

Source	GOs	Term	Type	e value	Identity
Sma3	mitochondrial outer membrane	GO:0005741	Cellular Component	2.172e-08	-
Sma3	rough endoplasmic reticulum membrane	GO:0030867	Cellular Component	1.674e-13	-
Sma3	1-phosphatidylinositol 4-kinase activity	GO:0004430	Molecular Function	1.005e-12	-
Sma3	kinase activity	GO:0016301	Molecular Function	5.994e-10	-
Sma3	phosphotransferase activity, alcohol group as acceptor	GO:0016773	Molecular Function	1.446e-13	-
Sma3	phosphatidylinositol phosphorylation	GO:0046854	Biological Process	1.555e-14	-
Sma3	phosphatidylinositol-mediated signaling	GO:0048015	Biological Process	1.205e-22	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Phosphatidylinositol 3-/4-kinase, catalytic domain	IPR000403	-	4.252e-21	-
Sma3	Protein kinase-like domain	IPR011009	-	3.915e-09	-
Sma3	Phosphatidylinositol Kinase	IPR015433	-	1.205e-22	-
Sma3	Phosphatidylinositol 3/4-kinase, conserved site	IPR018936	-	9.541e-22	-

Source	Species	ID	Description	e value	Identity
RefSeq	Danio rerio	NP_001030149	phosphatidylinositol 4-kinase beta [Danio rerio]	2.0e-19	73%
Ensembl	Danio rerio	ENSDARP00000099330	-	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: actinopterygii.fasta

Fln subject: H2SZZ4

Fln msg: Distance to subject end: 158 aas, your sequence is shorter than subject: 52 - 832

Fln protein: SGMIEPVLNAVSLHQIKKHSKLTLLQYFEHEFGPQNSEEFLTAQKNFVQSCA

Protein Length: 53

Fln nts: CAGTGGTATGATAGAGCCCGTGTTGAACGCGGTCTCCCTACATCAGATAAAGAAACACAGTAAGCTTACGCTCCTACAGTACTTTGAGCACGAGTTTGGGCCGCAGAATAGCGAAGAATTTCTCACGGCCCAGAAAAACTTTGTTCAGAGTTGTGCT

Fln Alignment:

Contig54___SGMIEPVLNAVSLHQIKKHSKLTLLQYFEHEFGPQNSEEFLTAQKNFVQSCA
H2SZZ4_______________SGMIEPVVNAVSLHQVKKHSQLSLLDYFLQEHGAPTTEAFLTAQRNFVQSCA

Curation

No curations to show

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