SoleaDB

Home

Assembly Name: Immune System v1.0

UniGene Name: mmc_v1.0_unigene24

Length: 668 nt

UniGene Fasta

Ace file of the UniGene mmc_v1.0_unigene24

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
Solea senegalensis v1.0 (global assembly)	solea_v1.0_unigene19099	9/11
Solea senegalensis v1.0 (global assembly)	solea_v1.0_unigene29753	2/11

Source	Descriptions	Term	Type	Identity
FL-Next	Q6PC79 tr=WD repeat domain 21; Danio rerio (Zebrafish) (Brachydanio rerio).	-	-	77%
AutoFact	wdr21, MGC73069, zgc:73069; WD repeat domain 21; K11799 WD repeat-containing protein 21A	-	-	74%
Blast2go	ddb1- and cul4-associated factor 4-like	-	-	84%

Source	GOs	Term	Type	e value	Identity
Blast2go	Cul4-RING ubiquitin ligase complex	GO:0080008	Cellular Component	0.0	84%

Full-Lengther Next Prediction

SNPs (tot: 0)

Position	A %	C %	G %	T %	Probability
308			33	66	0.997452
460		83	16		0.994512
461			16	83	0.994512
463		83	16		0.994512
515		20		80	0.995493
566		80	20		0.995493
567		80	20		0.995493
569			20	80	0.995493
642	50		25		0.995533
652		75		25	0.996473

Curation

Back

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain