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Assembly Name: Solea solea v1.0 (global assembly)

Name: Laminin B type IV

Term: IPR000034  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
solea_solea_v1.0_unigene150 Solea solea v1.0 (global assembly) 3689
• FL-Next: tr=Laminin alpha 2 chain; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• AutoFact: Unassigned protein
Internal
solea_solea_v1.0_unigene1179 Solea solea v1.0 (global assembly) 8449
• FL-Next: sp=Laminin subunit gamma-1; Xenopus tropicalis (Western clawed frog) (Silurana tropicalis). 1.0e-23
• AutoFact: Unassigned protein
Complete
solea_solea_v1.0_unigene1707 Solea solea v1.0 (global assembly) 5891
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Uncharacterized protein 0.0
• AutoFact: Unassigned protein
Complete
solea_solea_v1.0_unigene3168 Solea solea v1.0 (global assembly) 3323
• Sma3: Netrin-1 2.207e-12
• AutoFact: Unassigned protein
solea_solea_v1.0_unigene6960 Solea solea v1.0 (global assembly) 2884
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• AutoFact: Unassigned protein
Putative C-terminus
solea_solea_v1.0_unigene13448 Solea solea v1.0 (global assembly) 5577
• AutoFact: Unassigned protein
solea_solea_v1.0_unigene13557 Solea solea v1.0 (global assembly) 5645
• FL-Next: tr=Uncharacterized protein; Gasterosteus aculeatus (Three-spined stickleback). 0.0
• AutoFact: Unassigned protein
Putative Complete
solea_solea_v1.0_unigene17823 Solea solea v1.0 (global assembly) 6712
• FL-Next: tr=Laminin gamma-1; Oryzias latipes (Medaka fish) (Japanese ricefish). 2.0e-30
• Sma3: Uncharacterized protein 1.493e-09
• AutoFact: Laminin gamma-1 n=1 Tax=Oryzias latipes RepID=D7UU22_ORYLA 0.0
Putative Complete
solea_solea_v1.0_unigene17824 Solea solea v1.0 (global assembly) 6693
• FL-Next: tr=Laminin gamma-1; Oryzias latipes (Medaka fish) (Japanese ricefish). 0.0
• Sma3: Uncharacterized protein 1.493e-09
• AutoFact: Laminin gamma-1 n=1 Tax=Oryzias latipes RepID=D7UU22_ORYLA 0.0
Putative Complete
solea_solea_v1.0_unigene17825 Solea solea v1.0 (global assembly) 6743
• FL-Next: tr=Laminin gamma-1; Oryzias latipes (Medaka fish) (Japanese ricefish). 0.0
• Sma3: Uncharacterized protein 1.999e-09
• AutoFact: Laminin gamma-1 n=1 Tax=Oryzias latipes RepID=D7UU22_ORYLA 0.0
Putative Complete
solea_solea_v1.0_unigene17826 Solea solea v1.0 (global assembly) 6601
• FL-Next: sp=Laminin subunit gamma-1; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Uncharacterized protein 0.0
• AutoFact: Unassigned protein
Putative Complete
solea_solea_v1.0_unigene24169 Solea solea v1.0 (global assembly) 7038
• FL-Next: tr=Laminin beta 1; Danio rerio (Zebrafish) (Brachydanio rerio). 9.0e-36
• Sma3: Uncharacterized protein 5.119e-11
• AutoFact: Unassigned protein
Putative Complete
solea_solea_v1.0_unigene24228 Solea solea v1.0 (global assembly) 2949
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Laminin subunit gamma-1 6.304e-09
• AutoFact: Unassigned protein
Internal
solea_solea_v1.0_unigene26326 Solea solea v1.0 (global assembly) 11644
• FL-Next: tr=Uncharacterized protein; Oryzias latipes (Medaka fish) (Japanese ricefish). 0.0
• AutoFact: Unassigned protein
Putative Complete
solea_solea_v1.0_unigene26327 Solea solea v1.0 (global assembly) 10748
• FL-Next: tr=Uncharacterized protein; Oryzias latipes (Medaka fish) (Japanese ricefish). 0.0
• AutoFact: Unassigned protein
Putative Complete
solea_solea_v1.0_unigene26328 Solea solea v1.0 (global assembly) 10477
• AutoFact: Unassigned protein
solea_solea_v1.0_unigene26769 Solea solea v1.0 (global assembly) 12120
• Sma3: Chromosome 14 SCAF15003, whole genome shotgun sequence. 5.532e-08
• AutoFact: Unassigned protein
solea_solea_v1.0_unigene28171 Solea solea v1.0 (global assembly) 2978
• FL-Next: tr=Uncharacterized protein; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
• Sma3: Netrin-3 6.598e-09
• AutoFact: Unassigned protein
N-terminus
solea_solea_v1.0_unigene31847 Solea solea v1.0 (global assembly) 2620
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Uncharacterized protein 2.517e-12
• AutoFact: Unassigned protein
Internal
solea_solea_v1.0_unigene34731 Solea solea v1.0 (global assembly) 2259
• AutoFact: Unassigned protein
Sure coding

Go to Annotations List

Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain