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Assembly Name: Solea solea v1.0 (global assembly)

Name: PAS domain

Term: IPR000014  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
solea_solea_v1.0_unigene1386 Solea solea v1.0 (global assembly) 2018
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Clock protein 1.162e-12
• AutoFact: Clock-3a protein n=2 Tax=Percomorpha RepID=Q06AH6_HAPBU 0.0
N-terminus
solea_solea_v1.0_unigene1650 Solea solea v1.0 (global assembly) 7550
• FL-Next: tr=Aryl hydrocarbon receptor 2; Pagrus major (Red sea bream) (Chrysophrys major). 0.0
• Sma3: Aryl hydrocarbon receptor 2 5.60519e-45
• AutoFact: Aryl hydrocarbon receptor 2 n=1 Tax=Pagrus major RepID=Q4LER2_PAGMA 0.0
Putative Complete
solea_solea_v1.0_unigene2754 Solea solea v1.0 (global assembly) 6968
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 4.0e-38
• Sma3: Uncharacterized protein 0.0
• AutoFact: Unassigned protein
Putative Complete
solea_solea_v1.0_unigene3158 Solea solea v1.0 (global assembly) 6708
• FL-Next: tr=Aryl hydrocarbon receptor 2B; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
• Sma3: Aryl hydrocarbon receptor 2 8.78306e-41
• AutoFact: Aryl hydrocarbon receptor 2B n=4 Tax=Tetraodontidae RepID=Q4JHL3_TAKRU 0.0
Complete
solea_solea_v1.0_unigene4190 Solea solea v1.0 (global assembly) 5945
• FL-Next: tr=Ncoa3 protein; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
• AutoFact: Unassigned protein
Putative Complete
solea_solea_v1.0_unigene4549 Solea solea v1.0 (global assembly) 6305
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Uncharacterized protein 0.0
• AutoFact: PREDICTED: high affinity cAMP-specific and IBMX-insensitive 3'''',5''''-cyclic phosphodiesterase 8B-like n=1 Tax=Danio rerio RepID=UPI0002027C19 0.0
Complete
solea_solea_v1.0_unigene5211 Solea solea v1.0 (global assembly) 802
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Potassium voltage-gated channel subfamily H member 2 1.721e-11
• AutoFact: PREDICTED: potassium voltage-gated channel subfamily H member 8-like, partial n=1 Tax=Meleagris gallopavo RepID=UPI00020359DC 0.0
Internal
solea_solea_v1.0_unigene6308 Solea solea v1.0 (global assembly) 2717
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Uncharacterized protein 0.0
• AutoFact: Unassigned protein
N-terminus
solea_solea_v1.0_unigene9085 Solea solea v1.0 (global assembly) 456
• FL-Next: tr=Uncharacterized protein; Gasterosteus aculeatus (Three-spined stickleback). 0.0
• AutoFact: Potassium voltage-gated channel, subfamily H (Eag-related), member 1 n=3 Tax=Danio rerio RepID=B3DHL9_DANRE 6.99949e-42
N-terminus
solea_solea_v1.0_unigene13236 Solea solea v1.0 (global assembly) 5018
• Sma3: Nuclear receptor coactivator 2 6.612e-19
• AutoFact: Nuclear receptor coactivator 2 n=1 Tax=Dicentrarchus labrax RepID=E6ZIN5_DICLA 0.0
solea_solea_v1.0_unigene13248 Solea solea v1.0 (global assembly) 2523
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Clock protein 1.162e-12
• AutoFact: Clock-3a protein n=2 Tax=Percomorpha RepID=Q06AH6_HAPBU 0.0
N-terminus
solea_solea_v1.0_unigene13290 Solea solea v1.0 (global assembly) 6208
• FL-Next: tr=Nuclear receptor coactivator 2; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
• Sma3: Nuclear receptor coactivator 2 0.0
• AutoFact: Nuclear receptor coactivator 2 n=1 Tax=Dicentrarchus labrax RepID=E6ZIN5_DICLA 0.0
Complete
solea_solea_v1.0_unigene14189 Solea solea v1.0 (global assembly) 2831
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 2.0e-28
• Sma3: Nuclear receptor coactivator 2 9.366e-09
• AutoFact: Unassigned protein
Putative C-terminus
solea_solea_v1.0_unigene14221 Solea solea v1.0 (global assembly) 1510
• FL-Next: tr=Ncoa3 protein; Dicentrarchus labrax (European seabass) (Morone labrax). 1.0e-26
• AutoFact: Unassigned protein
Putative C-terminus
solea_solea_v1.0_unigene15470 Solea solea v1.0 (global assembly) 3875
• FL-Next: tr=Potassium voltage-gated channel subfamily H member 1b; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Potassium voltage-gated channel subfamily H member 2 3.43e-11
• AutoFact: Unassigned protein
Putative C-terminus
solea_solea_v1.0_unigene15793 Solea solea v1.0 (global assembly) 3606
• FL-Next: tr=Aryl hydrocarbon receptor 2C; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
• Sma3: Aryl hydrocarbon receptor 2 5.60519e-45
• AutoFact: Aryl hydrocarbon receptor 2C n=2 Tax=Takifugu rubripes RepID=Q4JHL2_TAKRU 0.0
Complete
solea_solea_v1.0_unigene17655 Solea solea v1.0 (global assembly) 2104
• FL-Next: tr=Uncharacterized protein; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
• AutoFact: Aryl hydrocarbon receptor 1A n=4 Tax=Takifugu rubripes RepID=Q4JHL6_TAKRU 0.0
Putative C-terminus
solea_solea_v1.0_unigene18975 Solea solea v1.0 (global assembly) 2854
• FL-Next: tr=Uncharacterized protein; Oryzias latipes (Medaka fish) (Japanese ricefish). 4.0e-25
• Sma3: Vitellogenin 9.018e-15
Putative Complete
solea_solea_v1.0_unigene19094 Solea solea v1.0 (global assembly) 6670
• FL-Next: tr=Ncoa3 protein; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
• Sma3: Nuclear receptor coactivator 2 4.232e-19
• AutoFact: Unassigned protein
Putative Complete
solea_solea_v1.0_unigene19520 Solea solea v1.0 (global assembly) 7711
• FL-Next: tr=Uncharacterized protein; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
• Sma3: Uncharacterized protein 0.0
• AutoFact: Unassigned protein
Complete

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain