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Assembly Name: Solea solea v1.0 (global assembly)

Name: LDLR class B repeat

Term: IPR000033  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
solea_solea_v1.0_unigene448294 Solea solea v1.0 (global assembly) 4019
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Vitellogenin receptor 6.769e-14
• AutoFact: Unassigned protein
Putative C-terminus
solea_solea_v1.0_unigene448845 Solea solea v1.0 (global assembly) 8487
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Vitellogenin receptor 5.488e-14
• AutoFact: Unassigned protein
Putative Complete
solea_solea_v1.0_unigene448846 Solea solea v1.0 (global assembly) 8566
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Vitellogenin receptor 2.355e-14
• AutoFact: Unassigned protein
Putative Complete
solea_solea_v1.0_unigene449447 Solea solea v1.0 (global assembly) 4341
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Vitellogenin receptor 3.407e-14
• AutoFact: Unassigned protein
N-terminus
solea_solea_v1.0_unigene450603 Solea solea v1.0 (global assembly) 179
• Sma3: Uncharacterized protein 3.827e-14
unknown
solea_solea_v1.0_unigene451441 Solea solea v1.0 (global assembly) 6588
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• AutoFact: Unassigned protein
Putative Complete
solea_solea_v1.0_unigene451442 Solea solea v1.0 (global assembly) 6563
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• AutoFact: Unassigned protein
Putative Complete
solea_solea_v1.0_unigene452167 Solea solea v1.0 (global assembly) 3419
• Sma3: Low-density lipoprotein receptor-related protein 2 9.581e-09
• AutoFact: Unassigned protein
solea_solea_v1.0_unigene453028 Solea solea v1.0 (global assembly) 147
• Sma3: Uncharacterized protein 5.673e-12
unknown
solea_solea_v1.0_unigene453079 Solea solea v1.0 (global assembly) 247
• Sma3: Uncharacterized protein 2.795e-09
Sure coding
solea_solea_v1.0_unigene454023 Solea solea v1.0 (global assembly) 206
• Sma3: Uncharacterized protein 1.32e-13
Sure coding
solea_solea_v1.0_unigene454635 Solea solea v1.0 (global assembly) 748
• FL-Next: tr=Very low-density lipoprotein receptor; Solea senegalensis (Senegalese sole). 5.0e-40
• Sma3: Vitellogenin receptor 4.879e-18
• AutoFact: Very low-density lipoprotein receptor n=1 Tax=Solea senegalensis RepID=Q2L4C1_SOLSE 8.0e-40
N-terminus
solea_solea_v1.0_unigene454636 Solea solea v1.0 (global assembly) 1641
• FL-Next: tr=Very low-density lipoprotein receptor; Solea senegalensis (Senegalese sole). 0.0
• Sma3: Vitellogenin receptor 4.625e-21
• AutoFact: Very low-density lipoprotein receptor n=1 Tax=Solea senegalensis RepID=Q2L4C1_SOLSE 0.0
Putative N-terminus
solea_solea_v1.0_unigene454879 Solea solea v1.0 (global assembly) 254
• Sma3: Uncharacterized protein 1.513e-06
Sure coding
solea_solea_v1.0_unigene455412 Solea solea v1.0 (global assembly) 167
• Sma3: Uncharacterized protein 4.205e-11
unknown
solea_solea_v1.0_unigene457502 Solea solea v1.0 (global assembly) 167
• Sma3: Uncharacterized protein 5.765e-13
unknown
solea_solea_v1.0_unigene457701 Solea solea v1.0 (global assembly) 155
• Sma3: Uncharacterized protein 1.046e-08
unknown
solea_solea_v1.0_unigene458224 Solea solea v1.0 (global assembly) 179
• Sma3: Uncharacterized protein 9.808e-13
unknown
solea_solea_v1.0_unigene459048 Solea solea v1.0 (global assembly) 221
• Sma3: Uncharacterized protein 7.684e-15
Sure coding
solea_solea_v1.0_unigene459347 Solea solea v1.0 (global assembly) 206
• Sma3: Uncharacterized protein 3.021e-12
Sure coding

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain