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Assembly Name: Solea solea v1.0 (global assembly)

Name: Retinoid X receptor/HNF4

Term: IPR000003  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
solea_solea_v1.0_unigene1605 Solea solea v1.0 (global assembly) 7779
• FL-Next: tr=Uncharacterized protein; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
• Sma3: Uncharacterized protein 0.0
• AutoFact: Retinoic acid receptor RXR-beta-A n=4 Tax=Clupeocephala RepID=RXRBA_DANRE 0.0
Putative Complete
solea_solea_v1.0_unigene14041 Solea solea v1.0 (global assembly) 2680
• FL-Next: tr=Uncharacterized protein; Gasterosteus aculeatus (Three-spined stickleback). 0.0
• AutoFact: Novel protein (Zgc:77259) n=3 Tax=Clupeocephala RepID=Q6P117_DANRE 0.0
Putative C-terminus
solea_solea_v1.0_unigene16486 Solea solea v1.0 (global assembly) 6448
• Sma3: Retinoid X receptor gamma 4.517e-07
• AutoFact: Unassigned protein
solea_solea_v1.0_unigene18154 Solea solea v1.0 (global assembly) 7603
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Retinoic acid receptor RXR-gamma 2.175e-08
• AutoFact: Unassigned protein
Putative Complete
solea_solea_v1.0_unigene18769 Solea solea v1.0 (global assembly) 3823
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• AutoFact: Nuclear receptor subfamily 2 group F member 5 n=6 Tax=Clupeocephala RepID=NR2F5_DANRE 0.0
Putative Complete
solea_solea_v1.0_unigene24154 Solea solea v1.0 (global assembly) 3081
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Retinoid X receptor beta 4.58e-14
• AutoFact: Nuclear receptor subfamily 2, group C, member 1 n=3 Tax=Danio rerio RepID=Q503E0_DANRE 0.0
Putative Complete
solea_solea_v1.0_unigene42541 Solea solea v1.0 (global assembly) 2305
• FL-Next: tr=Hepatocyte nuclear factor 4 alpha; Sparus aurata (Gilthead sea bream). 0.0
• Sma3: Retinoid X receptor beta 3.048e-14
• AutoFact: Unassigned protein
Putative Complete
solea_solea_v1.0_unigene46703 Solea solea v1.0 (global assembly) 1629
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Retinoid X receptor alpha 0.0
• AutoFact: PREDICTED: retinoic acid receptor RXR-alpha-like n=1 Tax=Ailuropoda melanoleuca RepID=UPI0001DEB6B1 0.0
Putative C-terminus
solea_solea_v1.0_unigene47232 Solea solea v1.0 (global assembly) 2027
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• AutoFact: Unassigned protein
Putative Complete
solea_solea_v1.0_unigene52398 Solea solea v1.0 (global assembly) 6693
• Sma3: Retinoid X receptor gamma 1.813e-10
• AutoFact: Novel protein (Zgc:77259) n=3 Tax=Clupeocephala RepID=Q6P117_DANRE 0.0
solea_solea_v1.0_unigene52399 Solea solea v1.0 (global assembly) 6748
• Sma3: Retinoid X receptor gamma 1.813e-10
• AutoFact: Novel protein (Zgc:77259) n=3 Tax=Clupeocephala RepID=Q6P117_DANRE 0.0
solea_solea_v1.0_unigene52443 Solea solea v1.0 (global assembly) 10281
• Sma3: Retinoid X receptor beta 3.156e-14
• AutoFact: Unassigned protein
solea_solea_v1.0_unigene53391 Solea solea v1.0 (global assembly) 4077
• FL-Next: tr=Nr2f2 protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Retinoid X receptor gamma 7.816e-11
• AutoFact: Unassigned protein
Putative Complete
solea_solea_v1.0_unigene54395 Solea solea v1.0 (global assembly) 2363
• FL-Next: tr='Hepatocyte nuclear factor 4, gamma'; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
• Sma3: 'Hepatocyte nuclear factor 4, gamma' 0.0
• AutoFact: 'Hepatocyte nuclear factor 4, gamma' n=2 Tax=Percomorpha RepID=E6ZIG6_DICLA 0.0
Putative Complete
solea_solea_v1.0_unigene54454 Solea solea v1.0 (global assembly) 2389
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Uncharacterized protein 0.0
• AutoFact: Retinoic acid receptor RXR-alpha n=40 Tax=Euteleostomi RepID=RXRA_MOUSE 0.0
Complete
solea_solea_v1.0_unigene55668 Solea solea v1.0 (global assembly) 1893
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Retinoid X receptor gamma 0.0
• AutoFact: Retinoid X receptor gamma n=1 Tax=Sebastiscus marmoratus RepID=B5TEI1_9PERC 0.0
Complete
solea_solea_v1.0_unigene55669 Solea solea v1.0 (global assembly) 2189
• FL-Next: tr=Uncharacterized protein; Gasterosteus aculeatus (Three-spined stickleback). 0.0
• Sma3: Retinoid X receptor 6.856e-17
• AutoFact: Retinoid X receptor gamma n=1 Tax=Sebastiscus marmoratus RepID=B5TEI1_9PERC 0.0
Putative Complete
solea_solea_v1.0_unigene55670 Solea solea v1.0 (global assembly) 2481
• FL-Next: tr=Uncharacterized protein; Gasterosteus aculeatus (Three-spined stickleback). 0.0
• Sma3: Retinoid X receptor gamma 1.322e-10
• AutoFact: Retinoid X receptor gamma n=1 Tax=Sebastiscus marmoratus RepID=B5TEI1_9PERC 0.0
Putative Complete
solea_solea_v1.0_unigene69992 Solea solea v1.0 (global assembly) 2865
• FL-Next: tr=Uncharacterized protein; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
• Sma3: Retinoid X receptor gamma 8.066e-11
• AutoFact: Unassigned protein
Putative Complete
solea_solea_v1.0_unigene70095 Solea solea v1.0 (global assembly) 7157
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Uncharacterized protein 0.0
• AutoFact: Retinoic acid receptor RXR-beta-A n=4 Tax=Clupeocephala RepID=RXRBA_DANRE 0.0
Complete

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain