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Assembly Name: Solea senegalensis v3.0 (global assembly)

Name: nucleosome

Term: GO:0000786  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
solea_v3.0_unigene3714 Solea senegalensis v3.0 (global assembly) 1550
• Sma3: Histone H2A 0.0
• AutoFact: PREDICTED: histone H2A.V-like n=1 Tax=Ailuropoda melanoleuca RepID=UPI0001DEBDBB 0.0
solea_v3.0_unigene3824 Solea senegalensis v3.0 (global assembly) 789
• FL-Next: tr=Histone acetyltransferase MYST4; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
• Sma3: Histone acetyltransferase MYST4 2.829e-10
• AutoFact: Histone acetyltransferase MYST4 n=1 Tax=Dicentrarchus labrax RepID=E6ZHG4_DICLA 0.0
Internal
solea_v3.0_unigene4610 Solea senegalensis v3.0 (global assembly) 279
• FL-Next: sp=Histone H2A; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Histone H2A 8.01262e-42
• AutoFact: Histone H2A n=2 Tax=Salmo salar RepID=B5X351_SALSA 4.0e-37
Internal
solea_v3.0_unigene5068 Solea senegalensis v3.0 (global assembly) 798
• FL-Next: sp=Histone H2A; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Histone H2A 0.0
• AutoFact: Histone H2A n=2 Tax=Salmo salar RepID=B5X351_SALSA 0.0
Internal
solea_v3.0_unigene5317 Solea senegalensis v3.0 (global assembly) 880
• FL-Next: sp=Histone H2A; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Histone H2A 0.0
• AutoFact: H2A histone family, member V; K11251 histone H2A 0.0
Complete
solea_v3.0_unigene6934 Solea senegalensis v3.0 (global assembly) 1162
• FL-Next: sp=Histone H2A; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Histone H2A 0.0
• AutoFact: PREDICTED: similar to histone H2A n=1 Tax=Canis lupus familiaris RepID=UPI00005A3496 4.0e-24
Complete
solea_v3.0_unigene8117 Solea senegalensis v3.0 (global assembly) 793
• FL-Next: tr=Centromere protein A; Etheostoma tallapoosae (Tallapoosa darter). 0.0
• Sma3: Centromere protein A 0.0
• AutoFact: Histone H3 n=2 Tax=Salmo salar RepID=B9EMI5_SALSA 0.0
Complete
solea_v3.0_unigene9039 Solea senegalensis v3.0 (global assembly) 2118
• FL-Next: sp=Histone H2A; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Histone H2A 0.0
• AutoFact: Histone H2A (Fragment) n=2 Tax=Tetraodontidae RepID=Q4RS18_TETNG 0.0
Complete
solea_v3.0_unigene9481 Solea senegalensis v3.0 (global assembly) 983
• FL-Next: sp=Histone H3; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: GekBS038P 0.0
• AutoFact: Histone H3 n=1 Tax=Harpegnathos saltator RepID=E2BMC4_9HYME 0.0
Putative Complete
solea_v3.0_unigene10043 Solea senegalensis v3.0 (global assembly) 691
• FL-Next: sp=Histone H3; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: GekBS038P 0.0
• AutoFact: Histone H3 n=1 Tax=Harpegnathos saltator RepID=E2BMC4_9HYME 0.0
Complete
solea_v3.0_unigene11137 Solea senegalensis v3.0 (global assembly) 424
• FL-Next: tr=Novel histone protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Histone H1 6.42e-19
• AutoFact: Novel histone protein n=1 Tax=Danio rerio RepID=B0R0K9_DANRE 2.0e-16
N-terminus
solea_v3.0_unigene12659 Solea senegalensis v3.0 (global assembly) 1021
• FL-Next: sp=Histone H2B; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Histone H2B 0.0
• AutoFact: Histone H2B 1/2 n=40 Tax=Euteleostomi RepID=H2B1_DANRE 8.00141e-43
Complete
solea_v3.0_unigene13243 Solea senegalensis v3.0 (global assembly) 1032
• FL-Next: tr=Chromosome 12 SCAF15007, whole genome shotgun sequence; nigroviridis). 0.0
• Sma3: Histone acetyltransferase MYST4 9.09e-10
• AutoFact: myst3, bmd, moz; MYST histone acetyltransferase (monocytic leukemia) 3 (EC:2.3.1.48); K11305 histone acetyltransferase MYST3 [EC:2.3.1.48] 0.0
C-terminus
solea_v3.0_unigene14136 Solea senegalensis v3.0 (global assembly) 421
• FL-Next: tr=Histone acetyltransferase MYST4; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
• AutoFact: Histone acetyltransferase MYST4 n=1 Tax=Dicentrarchus labrax RepID=E6ZHG4_DICLA 0.0
Internal
solea_v3.0_unigene14729 Solea senegalensis v3.0 (global assembly) 794
• FL-Next: sp=Histone H1; Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri). 0.0
• Sma3: Histone H1 1.243e-21
• AutoFact: Histone H1 n=2 Tax=Salmoninae RepID=H1_ONCMY 2.0e-11
Putative Complete
solea_v3.0_unigene15423 Solea senegalensis v3.0 (global assembly) 1213
• FL-Next: tr=Histone acetyltransferase MYST4; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
• Sma3: Histone acetyltransferase MYST4 1.015e-09
• AutoFact: Histone acetyltransferase MYST4 n=1 Tax=Dicentrarchus labrax RepID=E6ZHG4_DICLA 0.0
N-terminus
solea_v3.0_unigene18885 Solea senegalensis v3.0 (global assembly) 994
• FL-Next: sp=Histone H2A; Carassius gibelio (silver crucian carp). 0.0
• Sma3: Histone H2A 3.768e-10
• AutoFact: Histone H2A n=2 Tax=Deuterostomia RepID=C1BVY6_ESOLU 1.0e-05
C-terminus
solea_v3.0_unigene19097 Solea senegalensis v3.0 (global assembly) 428
• FL-Next: sp=Histone H2A; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Histone H2A 0.0
• AutoFact: PREDICTED: similar to histone H2A n=1 Tax=Canis lupus familiaris RepID=UPI00005A3496 4.00001e-41
N-terminus
solea_v3.0_unigene20660 Solea senegalensis v3.0 (global assembly) 567
• FL-Next: tr=Uncharacterized protein; Gasterosteus aculeatus (Three-spined stickleback). 0.0
• AutoFact: similar to SNF2 histone linker PHD RING helicase 0.0
Internal
solea_v3.0_unigene21332 Solea senegalensis v3.0 (global assembly) 1012
• FL-Next: sp=Histone H2A; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Histone H2A 0.0
• AutoFact: Histone H2A n=1 Tax=Danio rerio RepID=E7F7N9_DANRE 0.0
Complete

Go to Annotations List

Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain