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Assembly Name: Solea senegalensis v3.0 (global assembly)

Name: autophagic vacuole assembly

Term: GO:0000045  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
solea_v3.0_unigene46411 Solea senegalensis v3.0 (global assembly) 1198
• FL-Next: sp=Autophagy-related protein 3; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: APG3-like 0.0
• AutoFact: apg3l, atg3, wu:fb15g12, zgc:64156; APG3 autophagy 3-like; K08343 autophagy-related protein 3 0.0
Complete
solea_v3.0_unigene71823 Solea senegalensis v3.0 (global assembly) 249
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: WIPI-2 5.588e-10
• AutoFact: WD repeat domain phosphoinositide-interacting protein 1 n=5 Tax=Percomorpha RepID=E6ZGQ9_DICLA 7.0e-28
Internal
solea_v3.0_unigene106687 Solea senegalensis v3.0 (global assembly) 346
• FL-Next: sp=Autophagy-related protein 3; Gasterosteus aculeatus (Three-spined stickleback). 0.0
• Sma3: Autophagy-related protein 3 1.24716e-43
• AutoFact: apg3l, atg3, wu:fb15g12, zgc:64156; APG3 autophagy 3-like; K08343 autophagy-related protein 3 9.0e-17
C-terminus
solea_v3.0_unigene128447 Solea senegalensis v3.0 (global assembly) 482
• FL-Next: tr=Uncharacterized protein; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
• Sma3: WIPI-2 5.421e-11
• AutoFact: similar to WD repeat domain, phosphoinositide interacting 2 1.0e-07
Putative N-terminus
solea_v3.0_unigene194866 Solea senegalensis v3.0 (global assembly) 325
• FL-Next: sp=Autophagy-related protein 3; nigroviridis). 0.0
• Sma3: Autophagy-related protein 3 1.73761e-43
• AutoFact: Autophagy-related protein 3 (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3ZEM6_BRAFL 3.0e-31
Internal
solea_v3.0_unigene220677 Solea senegalensis v3.0 (global assembly) 204
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: WIPI-2 5.588e-10
• AutoFact: WD repeat domain phosphoinositide-interacting protein 1 n=5 Tax=Percomorpha RepID=E6ZGQ9_DICLA 1.0e-24
Internal
solea_v3.0_unigene240614 Solea senegalensis v3.0 (global assembly) 348
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: WIPI-2 5.195e-11
• AutoFact: PREDICTED: WD repeat domain phosphoinositide-interacting protein 2-like n=1 Tax=Monodelphis domestica RepID=UPI00020F5C39 1.0e-10
N-terminus
solea_v3.0_unigene247598 Solea senegalensis v3.0 (global assembly) 306
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: WIPI-2 5.588e-10
• AutoFact: WD repeat domain phosphoinositide-interacting protein 1 n=5 Tax=Percomorpha RepID=E6ZGQ9_DICLA 3.0e-39
Internal
solea_v3.0_unigene251514 Solea senegalensis v3.0 (global assembly) 208
• FL-Next: tr=Uncharacterized protein; Oryzias latipes (Medaka fish) (Japanese ricefish). 0.0
• Sma3: WIPI-2 5.228e-10
• AutoFact: PREDICTED: WD repeat domain phosphoinositide-interacting protein 2-like n=1 Tax=Monodelphis domestica RepID=UPI00020F5C39 6.0e-30
Internal

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain