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Assembly Name: Solea senegalensis v3.0 (global assembly)

Name: Laminin B type IV

Term: IPR000034  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
solea_v3.0_unigene1574 Solea senegalensis v3.0 (global assembly) 483
• FL-Next: tr=Uncharacterized protein; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
• AutoFact: similar to laminin alpha 3; K06240 laminin, alpha 3/5 2.0e-22
Internal
solea_v3.0_unigene4850 Solea senegalensis v3.0 (global assembly) 492
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Laminin, alpha 5 1.962e-14
• AutoFact: Laminin alpha 5 n=4 Tax=Danio rerio RepID=D7PSA0_DANRE 0.0
Internal
solea_v3.0_unigene13764 Solea senegalensis v3.0 (global assembly) 1239
• FL-Next: tr=Uncharacterized protein; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
• AutoFact: similar to laminin alpha 3; K06240 laminin, alpha 3/5 0.0
Internal
solea_v3.0_unigene14960 Solea senegalensis v3.0 (global assembly) 874
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Laminin, alpha 5 2.109e-13
• AutoFact: lama5, cb402, im:7138247, sb:cb402, wu:fb81a10; laminin, alpha 5; K06240 laminin, alpha 3/5 0.0
Internal
solea_v3.0_unigene15400 Solea senegalensis v3.0 (global assembly) 474
• FL-Next: tr=Uncharacterized protein; Gasterosteus aculeatus (Three-spined stickleback). 0.0
• Sma3: Novel protein similar to human laminin, gamma 3 (LAMC3) 6.51e-06
• AutoFact: lamc1, lamb2; laminin, gamma 1; K05635 laminin, gamma 1 3.0e-11
Internal
solea_v3.0_unigene16912 Solea senegalensis v3.0 (global assembly) 845
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Heparan sulfate proteoglycan 2 3.222e-09
• AutoFact: HSPG2, HSPG; heparan sulfate proteoglycan 2; K06255 heparan sulfate proteoglycan 2 (perlecan) 0.0
Internal
solea_v3.0_unigene17641 Solea senegalensis v3.0 (global assembly) 255
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Heparan sulfate proteoglycan 2 1.029e-09
• AutoFact: basement membrane-specific heparan sulfate proteoglycan core protein-like 5.0e-16
Internal
solea_v3.0_unigene17670 Solea senegalensis v3.0 (global assembly) 237
• FL-Next: tr=LamC1 protein; nigroviridis). 0.0
• Sma3: Laminin subunit gamma-1 3.547e-10
• AutoFact: Laminin gamma-1 chain (Fragment) n=1 Tax=Siniperca chuatsi RepID=D9ILW6_SINCH 8.0e-33
Internal
solea_v3.0_unigene23550 Solea senegalensis v3.0 (global assembly) 939
• FL-Next: tr=Laminin alpha 5; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Laminin, alpha 5 1.246e-09
• AutoFact: lama5, cb402, im:7138247, sb:cb402, wu:fb81a10; laminin, alpha 5; K06240 laminin, alpha 3/5 0.0
Internal
solea_v3.0_unigene24397 Solea senegalensis v3.0 (global assembly) 1024
• FL-Next: tr=Heparan sulfate proteoglycan 2; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Heparan sulfate proteoglycan 2 1.574e-09
• AutoFact: HSPG2, PLC, PRCAN, SJA, SJS, SJS1; heparan sulfate proteoglycan 2; K06255 heparan sulfate proteoglycan 2 (perlecan) 1.0e-36
N-terminus
solea_v3.0_unigene28048 Solea senegalensis v3.0 (global assembly) 371
• FL-Next: tr=Uncharacterized protein; Gasterosteus aculeatus (Three-spined stickleback). 0.0
• AutoFact: si:dkey-245l10.1; K06247 laminin, gamma 3 4.0e-09
Internal
solea_v3.0_unigene28086 Solea senegalensis v3.0 (global assembly) 426
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Heparan sulfate proteoglycan 2 2.0e-08
• AutoFact: basement membrane-specific heparan sulfate proteoglycan core protein-like 3.0e-35
Internal
solea_v3.0_unigene28687 Solea senegalensis v3.0 (global assembly) 478
• FL-Next: tr=Laminin alpha 5; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Laminin, alpha 5 1.117e-09
• AutoFact: lama5, cb402, im:7138247, sb:cb402, wu:fb81a10; laminin, alpha 5; K06240 laminin, alpha 3/5 4.0e-38
Internal
solea_v3.0_unigene29258 Solea senegalensis v3.0 (global assembly) 383
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• AutoFact: similar to laminin alpha 3; K06240 laminin, alpha 3/5 3.0e-21
Internal
solea_v3.0_unigene38623 Solea senegalensis v3.0 (global assembly) 376
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Heparan sulfate proteoglycan 2 2.344e-09
• AutoFact: HSPG2; heparan sulfate proteoglycan 2; K06255 heparan sulfate proteoglycan 2 (perlecan) 5.60519e-45
Internal
solea_v3.0_unigene38954 Solea senegalensis v3.0 (global assembly) 512
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Heparan sulfate proteoglycan 2 4.801e-09
• AutoFact: HSPG2, PLC, PRCAN, SJA, SJS, SJS1; heparan sulfate proteoglycan 2; K06255 heparan sulfate proteoglycan 2 (perlecan) 0.0
Internal
solea_v3.0_unigene39280 Solea senegalensis v3.0 (global assembly) 442
• FL-Next: tr=Laminin gamma-1; Oryzias latipes (Medaka fish) (Japanese ricefish). 0.0
• Sma3: Netrin 1 2.74e-13
• AutoFact: Laminin gamma-1 n=1 Tax=Oryzias latipes RepID=D7UU22_ORYLA 0.0
Internal
solea_v3.0_unigene49136 Solea senegalensis v3.0 (global assembly) 461
• FL-Next: tr=Heparan sulfate proteoglycan 2; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Heparan sulfate proteoglycan 2 2.024e-09
• AutoFact: basement membrane-specific heparan sulfate proteoglycan core protein-like 9.80909e-45
Internal
solea_v3.0_unigene50452 Solea senegalensis v3.0 (global assembly) 844
• FL-Next: tr=Uncharacterized protein; nigroviridis). 0.0
• Sma3: Heparan sulfate proteoglycan 2 2.647e-09
• AutoFact: sid4; secreted immunoglobulin domain 4 0.0
C-terminus
solea_v3.0_unigene50574 Solea senegalensis v3.0 (global assembly) 485
• FL-Next: tr=Uncharacterized protein; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
• Sma3: Novel protein similar to human laminin, gamma 3 (LAMC3) 6.51e-06
• AutoFact: si:dkey-245l10.1; K06247 laminin, gamma 3 2.0e-21
Internal

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain