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Assembly Name: Solea senegalensis v3.0 (global assembly)

Name: transcription regulatory region sequence-specific DNA binding

Term: GO:0000976  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
solea_v3.0_unigene701 Solea senegalensis v3.0 (global assembly) 479
• FL-Next: tr=Uncharacterized protein; Gasterosteus aculeatus (Three-spined stickleback). 0.0
• AutoFact: Homeobox protein Dlx4a n=2 Tax=Danio rerio RepID=DLX4A_DANRE 6.0e-11
C-terminus
solea_v3.0_unigene3979 Solea senegalensis v3.0 (global assembly) 217
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Dlx2a 1.535e-14
• AutoFact: dlx2a, dlx-2, dlx2, zgc:110518; distal-less homeobox gene 2a; K09315 homeobox protein DLX2/3/5 8.0e-06
Putative C-terminus
solea_v3.0_unigene11759 Solea senegalensis v3.0 (global assembly) 865
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Dlx1a protein 0.0
• AutoFact: Homeobox protein Dlx1a n=3 Tax=Euteleostomi RepID=DLX1A_DANRE 0.0
C-terminus
solea_v3.0_unigene14651 Solea senegalensis v3.0 (global assembly) 427
• FL-Next: tr=Homeobox protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Developing brain homeobox 1b 8.065e-09
• AutoFact: DBX2; developing brain homeobox 2 4.0e-24
C-terminus
solea_v3.0_unigene20156 Solea senegalensis v3.0 (global assembly) 1116
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Chromosome 17 SCAF7369, whole genome shotgun sequence 0.0
• AutoFact: Homeobox protein EMX2 n=2 Tax=Euteleostei RepID=B5X1J6_SALSA 0.0
Complete
solea_v3.0_unigene22770 Solea senegalensis v3.0 (global assembly) 761
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Ventral anterior homeobox 1 9.634e-09
• AutoFact: vax1; ventral anterior homeobox 1; K09318 homeobox protein ventral anterior 7.0e-23
Putative Complete
solea_v3.0_unigene29392 Solea senegalensis v3.0 (global assembly) 660
• FL-Next: tr=Uncharacterized protein; Oryzias latipes (Medaka fish) (Japanese ricefish). 0.0
• Sma3: Homeobox protein orthopedia B 4.948e-10
• AutoFact: otpb, cb977, otp, otp1; orthopedia homolog b 3.0e-29
C-terminus
solea_v3.0_unigene46792 Solea senegalensis v3.0 (global assembly) 244
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Developing brain homeobox 1b 1.856e-08
• AutoFact: PREDICTED: homeobox protein DBX1-like n=1 Tax=Anolis carolinensis RepID=UPI00020381F6 1.0e-38
Internal
solea_v3.0_unigene64542 Solea senegalensis v3.0 (global assembly) 301
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Distal-less homeobox 6 1.075e-09
• AutoFact: Homeobox protein Dlx1a n=3 Tax=Euteleostomi RepID=DLX1A_DANRE 2.0e-30
N-terminus
solea_v3.0_unigene66072 Solea senegalensis v3.0 (global assembly) 148
• FL-Next: tr=Uncharacterized protein; Oryzias latipes (Medaka fish) (Japanese ricefish). 0.0
• Sma3: H6 family homeobox 2 5.4e-12
• AutoFact: PREDICTED: homeobox protein MSX-2-like n=1 Tax=Anolis carolinensis RepID=UPI0002038714 4.0e-17
Internal
solea_v3.0_unigene75752 Solea senegalensis v3.0 (global assembly) 337
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• AutoFact: Unassigned protein
N-terminus
solea_v3.0_unigene83467 Solea senegalensis v3.0 (global assembly) 332
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Dlx2a 8.688e-14
• AutoFact: distal-less homeobox gene 2a-like; K09315 homeobox protein DLX2/3/5 1.0e-09
N-terminus
solea_v3.0_unigene88122 Solea senegalensis v3.0 (global assembly) 644
• FL-Next: tr=Homeodomain protein Nkx2.3; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Thyroid transcription factor 1 4.837e-12
• AutoFact: Tinman (Fragment) n=1 Tax=Euprymna scolopes RepID=Q49QY1_9MOLL 1.0e-33
N-terminus
solea_v3.0_unigene88433 Solea senegalensis v3.0 (global assembly) 513
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Homeobox protein Dlx4b 4.588e-12
• AutoFact: distal-less homeobox gene 2a-like; K09315 homeobox protein DLX2/3/5 0.0
Internal
solea_v3.0_unigene96282 Solea senegalensis v3.0 (global assembly) 458
• FL-Next: tr=Orthopedia protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Homeobox protein orthopedia B 4.477e-10
• AutoFact: Homeobox protein orthopedia B n=4 Tax=Danio rerio RepID=OTBP_DANRE 3.0e-31
C-terminus
solea_v3.0_unigene117358 Solea senegalensis v3.0 (global assembly) 477
• FL-Next: tr=Uncharacterized protein; Gasterosteus aculeatus (Three-spined stickleback). 0.0
• Sma3: Engrailed 1 4.942e-09
• AutoFact: Homeobox protein engrailed-2a n=3 Tax=Percomorpha RepID=E6ZJ00_DICLA 1.0e-37
C-terminus
solea_v3.0_unigene123557 Solea senegalensis v3.0 (global assembly) 528
• FL-Next: tr=Msx1 protein; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
• Sma3: Homeobox protein HMX3 1.468e-11
• AutoFact: msx1, Xmsx-1, hox-7, hox7, hyd1, msx-1, xmsx1; msh homeobox 1; K09341 homeobox protein MSX 0.0
C-terminus
solea_v3.0_unigene126760 Solea senegalensis v3.0 (global assembly) 512
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Homeobox protein EMX1 1.137e-09
• AutoFact: emx1, MGC101821, zgc:101821; empty spiracles homeobox 1; K09317 homeobox protein EMX 0.0
Putative N-terminus
solea_v3.0_unigene128328 Solea senegalensis v3.0 (global assembly) 474
• FL-Next: tr=Dlx5a protein; Haplochromis burtoni (Burton's mouthbrooder). 0.0
• Sma3: Homeobox protein Dlx4b 3.669e-12
• AutoFact: Dlx5a protein n=3 Tax=Percomorpha RepID=E0WEW5_HAPBU 0.0
Internal
solea_v3.0_unigene137495 Solea senegalensis v3.0 (global assembly) 206
• Sma3: Short stature homeobox 2.475e-09
• AutoFact: OAR domain containing protein 7.0e-06
unknown

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain