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Assembly Name: Hypothalamus f-wt v1.0

Name: tRNA binding

Term: GO:0000049  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
hpt_f_wt_v1.0_unigene1484 Hypothalamus f-wt v1.0 227
• FL-Next: tr=Multisynthetase complex auxiliary component p43; Anoplopoma fimbria (Sablefish). 0.0
• Sma3: Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 9.311e-15
• AutoFact: Multisynthetase complex auxiliary component p43 n=1 Tax=Anoplopoma fimbria RepID=C3KIH3_ANOFI 2.0e-13
C-terminus
hpt_f_wt_v1.0_unigene3009 Hypothalamus f-wt v1.0 567
• FL-Next: tr=Yars protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Tyrosyl-tRNA synthetase 3.811e-16
• AutoFact: Tyrosyl-tRNA synthetase, cytoplasmic n=3 Tax=Danio rerio RepID=SYYC_DANRE 0.0
C-terminus
hpt_f_wt_v1.0_unigene3727 Hypothalamus f-wt v1.0 393
• FL-Next: sp=Cytoplasmic tRNA 2-thiolation protein 1; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: ATP-binding domain-containing protein 3 2.386e-14
• AutoFact: Cytoplasmic tRNA 2-thiolation protein 1 n=3 Tax=Clupeocephala RepID=CTU1_DANRE 0.0
Internal
hpt_f_wt_v1.0_unigene5251 Hypothalamus f-wt v1.0 430
• FL-Next: tr=Chromosome 3 SCAF14553, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
• Sma3: PheRS 1.674e-19
• AutoFact: Phenylalanyl-tRNA synthetase alpha chain n=2 Tax=Danio rerio RepID=SYFA_DANRE 0.0
Putative N-terminus
hpt_f_wt_v1.0_unigene6819 Hypothalamus f-wt v1.0 167
• FL-Next: sp=tRNA wybutosine-synthesizing protein 5; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: tRNA wybutosine-synthesizing protein 5 8.506e-11
• AutoFact: MGC154110, im:7148946, m:7148946; zgc:154110 1.0e-20
Internal
hpt_f_wt_v1.0_unigene8934 Hypothalamus f-wt v1.0 104
• FL-Next: tr=Multisynthetase complex auxiliary component p43; Anoplopoma fimbria (Sablefish). 0.0
• Sma3: Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 1.071e-14
• AutoFact: Multisynthetase complex auxiliary component p43 n=1 Tax=Anoplopoma fimbria RepID=C3KIH3_ANOFI 4.0e-10
Internal

Go to Annotations List

Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain