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Assembly Name: Hypothalamus f-wt v1.0

Name: IQ motif, EF-hand binding site

Term: IPR000048  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
hpt_f_wt_v1.0_unigene76 Hypothalamus f-wt v1.0 322
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Ras protein-specific guanine nucleotide-releasing factor 2 1.719e-09
AutoFact: Ras protein-specific guanine nucleotide-releasing factor 1-like 0.0
C-terminus
hpt_f_wt_v1.0_unigene555 Hypothalamus f-wt v1.0 251
FL-Next: tr=Chromosome 6 SCAF14737, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: Ubiquitin protein ligase E3C 9.688e-10
AutoFact: Isoform 2 of Ubiquitin-protein ligase E3C n=4 Tax=Eutheria RepID=Q15386-2 3.0e-09
N-terminus
hpt_f_wt_v1.0_unigene591 Hypothalamus f-wt v1.0 222
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Myosin, heavy chain 10, non-muscle 8.664e-13
AutoFact: MYH10; myosin, heavy chain 10, non-muscle; K10352 myosin heavy chain 2.0e-30
Internal
hpt_f_wt_v1.0_unigene856 Hypothalamus f-wt v1.0 318
FL-Next: tr=Brain-specific polypeptide PEP-19; Anoplopoma fimbria (Sablefish). 0.0
Sma3: Brain-specific polypeptide PEP-19 0.0
AutoFact: pcp4a, fs99g04, wu:fs99g04; Purkinje cell protein 4a 1.0e-14
Complete
hpt_f_wt_v1.0_unigene3609 Hypothalamus f-wt v1.0 251
FL-Next: tr=Sodium channel protein Scn8a; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Voltage-gated sodium channel type IV alpha subunit Nav1.4b 0.0
AutoFact: UPI00016E6628 related cluster n=2 Tax=Takifugu rubripes RepID=UPI00016E6628 5.0e-19
Internal
hpt_f_wt_v1.0_unigene3940 Hypothalamus f-wt v1.0 207
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Myosin XVI 6.185e-10
AutoFact: MYO16; myosin XVI 2.0e-11
Putative N-terminus
hpt_f_wt_v1.0_unigene4100 Hypothalamus f-wt v1.0 141
FL-Next: tr=Myo1bl2 protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: PREDICTED: myosin-Ib isoform 2 n=1 Tax=Danio rerio RepID=UPI000202743B 2.0e-11
C-terminus
hpt_f_wt_v1.0_unigene4437 Hypothalamus f-wt v1.0 278
FL-Next: tr=Chromosome undetermined SCAF25215, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: Unconventional myosin-Ic 1.862e-14
AutoFact: PREDICTED: myosin-Ic-like, partial n=1 Tax=Meleagris gallopavo RepID=UPI0002036D77 2.0e-40
Internal
hpt_f_wt_v1.0_unigene5900 Hypothalamus f-wt v1.0 215
FL-Next: tr=Chromosome 7 SCAF14703, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: Unconventional myosin-Ic 2.844e-12
AutoFact: myo1c-a, MGC68653, MMI-beta-A, MMIb-A, mmib, myr2, nm1; myosin IC; K10356 myosin I 1.0e-31
Internal
hpt_f_wt_v1.0_unigene5910 Hypothalamus f-wt v1.0 165
FL-Next: tr=Novel protein similar to vertebrate Q motif and WD repeats 1 (IQWD1); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Ddb1 and cul4 associated factor 6 9.286e-10
AutoFact: dcaf6, iqwd1, si:rp71-20i5.1; ddb1 and cul4 associated factor 6; K11795 nuclear receptor interaction protein 9.0e-18
C-terminus

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain