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Assembly Name: Hypothalamus f-wt v1.0

Name: SWAP/Surp

Term: IPR000061  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
hpt_f_wt_v1.0_unigene1137 Hypothalamus f-wt v1.0 185
FL-Next: tr=U2-associated protein SR140; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
Sma3: Zgc:163098 1.209e-09
AutoFact: U2-associated protein SR140 n=4 Tax=Percomorpha RepID=E6ZIY5_DICLA 1.0e-20
Internal
hpt_f_wt_v1.0_unigene1156 Hypothalamus f-wt v1.0 271
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Splicing factor, suppressor of white-apricot homolog (Drosophila) 2.383e-10
AutoFact: sfrs8, MGC56184, srsf8, zgc:56184; splicing factor, arginine/serine-rich 8 (suppressor-of-white-apricot homolog, Drosophila) 1.0e-11
Putative C-terminus
hpt_f_wt_v1.0_unigene3429 Hypothalamus f-wt v1.0 372
Sma3: Si:dkey-181m9.9 5.904e-10
AutoFact: DUF1777 domain containing protein 4.0e-05
coding
hpt_f_wt_v1.0_unigene4228 Hypothalamus f-wt v1.0 382
FL-Next: tr=Novel protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Zgc:163098 2.999e-10
AutoFact: Novel protein n=2 Tax=Danio rerio RepID=A5PN19_DANRE 4.0e-18
Internal
hpt_f_wt_v1.0_unigene4505 Hypothalamus f-wt v1.0 151
FL-Next: tr=SR-related CTD associated factor 6; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: SR-related CTD associated factor 6 5.89e-06
AutoFact: PREDICTED: calcium homeostasis endoplasmic reticulum protein-like n=1 Tax=Sus scrofa RepID=UPI0001E86B6C 4.0e-08
Internal
hpt_f_wt_v1.0_unigene6126 Hypothalamus f-wt v1.0 255
FL-Next: tr=Novel protein similar to human splicing factor 3a, subunit 1, 120kD (SF3A1); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: sf3a1, MGC65786, MGC77239, si:dz150f13.2, wu:fc38e01, wu:fc50a11, wu:fj37c05, zgc:65786; splicing factor 3a, subunit 1; K12825 splicing factor 3A subunit 1 2.0e-14
Internal
hpt_f_wt_v1.0_unigene6870 Hypothalamus f-wt v1.0 153
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: sf3a1, MGC65786, MGC77239, si:dz150f13.2, wu:fc38e01, wu:fc50a11, wu:fj37c05, zgc:65786; splicing factor 3a, subunit 1; K12825 splicing factor 3A subunit 1 2.0e-12
Internal
hpt_f_wt_v1.0_unigene9196 Hypothalamus f-wt v1.0 322
Sma3: Splicing factor, arginine/serine-rich 6 4.077e-17
AutoFact: DUF1777 multi-domain protein 3.0e-13
coding

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain