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Assembly Name: Hypothalamus f-wt v1.0

Name: nucleotide binding

Term: GO:0000166  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
hpt_f_wt_v1.0_unigene116 Hypothalamus f-wt v1.0 339
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: RNA binding motif protein 15 6.822e-10
AutoFact: MGC83913 protein n=2 Tax=Xenopus RepID=Q6NRD2_XENLA 8.0e-29
Internal
hpt_f_wt_v1.0_unigene261 Hypothalamus f-wt v1.0 385
FL-Next: tr=Quinone oxidoreductase-like 1; Osmerus mordax (Rainbow smelt) (Atherina mordax). 0.0
Sma3: Crystallin, zeta (Quinone reductase)-like 1 7.629e-15
AutoFact: Quinone oxidoreductase-like 1 n=1 Tax=Osmerus mordax RepID=C1BJK9_OSMMO 5.0e-17
C-terminus
hpt_f_wt_v1.0_unigene385 Hypothalamus f-wt v1.0 387
FL-Next: tr=HIV-1 Tat interactive protein 2; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Tat-interacting protein Tip30 9.301e-06
AutoFact: htatip2, fb15b04, tip30, wu:fb15b04; HIV-1 Tat interactive protein 2 0.0
Internal
hpt_f_wt_v1.0_unigene458 Hypothalamus f-wt v1.0 391
FL-Next: tr=17 beta hydroxysteroid dehydrogenase 4; Salmo trutta fario. 0.0
Sma3: Hydroxysteroid (17-beta) dehydrogenase 4 1.36e-14
AutoFact: HSD17B4; hydroxysteroid (17-beta) dehydrogenase 4; K12405 3-hydroxyacyl-CoA dehydrogenase / 3a,7a,12a-trihydroxy-5b-cholest-24-enoyl-CoA hydratase [EC:1.1.1.35 4.2.1.107] 0.0
Internal
hpt_f_wt_v1.0_unigene469 Hypothalamus f-wt v1.0 294
FL-Next: tr=Chromosome 8 SCAF14587, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: GPN-loop GTPase 2 3.624e-15
AutoFact: gpn2, MGC92877, atpbd1b, zgc:92877; GPN-loop GTPase 2; K06883 0.0
Internal
hpt_f_wt_v1.0_unigene497 Hypothalamus f-wt v1.0 290
FL-Next: tr=Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial; Osmerus mordax (Rainbow smelt) (Atherina mordax). 0.0
Sma3: Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial 8.531e-14
AutoFact: mthfd2, MGC174756, MGC91891, wu:fb38b11, wu:fe12e11, zgc:91891; methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase; K13403 methylenetetrahydrofolate dehydrogenase(NAD+) / 5,10-methenyltetrahydrofolate cycl 8.0e-29
C-terminus
hpt_f_wt_v1.0_unigene577 Hypothalamus f-wt v1.0 274
FL-Next: tr=Dehydrogenase/reductase SDR family member 4; Salmo salar (Atlantic salmon). 0.0
Sma3: Dehydrogenase/reductase SDR family member 4 1.171e-15
AutoFact: Dehydrogenase/reductase SDR family member 4 n=1 Tax=Salmo salar RepID=B5X9J3_SALSA 1.0e-27
C-terminus
hpt_f_wt_v1.0_unigene718 Hypothalamus f-wt v1.0 211
FL-Next: tr=Chromosome 8 SCAF14587, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: GPN-loop GTPase 3 2.638e-10
AutoFact: gpn2, MGC92877, atpbd1b, zgc:92877; GPN-loop GTPase 2; K06883 2.0e-28
Internal
hpt_f_wt_v1.0_unigene822 Hypothalamus f-wt v1.0 259
FL-Next: tr=3-hydroxyacyl-CoA dehydrogenase type-2; Salmo salar (Atlantic salmon). 0.0
Sma3: Hydroxysteroid (17-beta) dehydrogenase 10 1.194e-10
AutoFact: Hydroxysteroid (17-beta) dehydrogenase 10 n=3 Tax=Otophysi RepID=Q5XJS8_DANRE 1.0e-26
N-terminus
hpt_f_wt_v1.0_unigene891 Hypothalamus f-wt v1.0 274
FL-Next: tr=Peptidyl-prolyl cis-trans isomerase-like 4; Anoplopoma fimbria (Sablefish). 0.0
Sma3: Peptidylprolyl isomerase (cyclophilin)-like 4 2.475e-10
AutoFact: Peptidylprolyl isomerase (Cyclophilin)-like 4 n=2 Tax=Danio rerio RepID=A5PM92_DANRE 9.0e-18
Putative N-terminus
hpt_f_wt_v1.0_unigene968 Hypothalamus f-wt v1.0 280
FL-Next: tr=Scaffold attachment factor B; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Novel protein similar to vertebrate scaffold attachment factor B family (Zgc:55387) 7.44e-06
AutoFact: safb, wu:fb40a03, wu:fd42g06, zgc:55387; scaffold attachment factor B 1.0e-35
Internal
hpt_f_wt_v1.0_unigene993 Hypothalamus f-wt v1.0 443
FL-Next: tr=Chromosome 7 SCAF13760, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: 15-hydroxyprostaglandin dehydrogenase 7.401e-23
AutoFact: MGC56585, zgc:77077; zgc:56585; K00069 15-hydroxyprostaglandin dehydrogenase (NAD) [EC:1.1.1.141] 5.99756e-43
Internal
hpt_f_wt_v1.0_unigene1078 Hypothalamus f-wt v1.0 296
FL-Next: tr=3-oxoacyl-acyl-carrier-protein reductase; Osmerus mordax (Rainbow smelt) (Atherina mordax). 0.0
Sma3: 3-oxoacyl-acyl-carrier-protein reductase 9.087e-11
AutoFact: adh_short domain containing protein 1.0e-05
N-terminus
hpt_f_wt_v1.0_unigene1137 Hypothalamus f-wt v1.0 185
FL-Next: tr=U2-associated protein SR140; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
Sma3: Zgc:163098 1.209e-09
AutoFact: U2-associated protein SR140 n=4 Tax=Percomorpha RepID=E6ZIY5_DICLA 1.0e-20
Internal
hpt_f_wt_v1.0_unigene1145 Hypothalamus f-wt v1.0 408
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: ELAV-like protein 1 1.562e-16
AutoFact: ELAV-like protein 2 n=28 Tax=Euteleostomi RepID=ELAV2_RAT 0.0
Internal
hpt_f_wt_v1.0_unigene1201 Hypothalamus f-wt v1.0 292
FL-Next: tr=Scaffold attachment factor B; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Novel protein similar to vertebrate scaffold attachment factor B family (Zgc:55387) 4.185e-06
AutoFact: safb, wu:fb40a03, wu:fd42g06, zgc:55387; scaffold attachment factor B 2.0e-24
C-terminus
hpt_f_wt_v1.0_unigene1461 Hypothalamus f-wt v1.0 239
FL-Next: tr=Tissue specific transplantation antigen P35B; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Tissue specific transplantation antigen P35B 1.442e-18
AutoFact: TSTA3, MGC137649; tissue specific transplantation antigen P35B (EC:1.1.1.271); K02377 GDP-L-fucose synthase [EC:1.1.1.271] 1.0e-34
Internal
hpt_f_wt_v1.0_unigene1632 Hypothalamus f-wt v1.0 659
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: RRM_1 domain containing protein 1.0e-08
C-terminus
hpt_f_wt_v1.0_unigene1635 Hypothalamus f-wt v1.0 245
FL-Next: tr=3-hydroxybutyrate dehydrogenase type 2; Anoplopoma fimbria (Sablefish). 0.0
Sma3: 3-hydroxybutyrate dehydrogenase type 2 4.685e-29
AutoFact: 3-hydroxybutyrate dehydrogenase type 2 n=3 Tax=Clupeocephala RepID=BDH2_DANRE 6.0e-16
N-terminus
hpt_f_wt_v1.0_unigene1714 Hypothalamus f-wt v1.0 273
FL-Next: tr=ELAV (Embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: ELAV-like protein 1 3.304e-12
AutoFact: elavl4, elrd, wu:fc24h01, zHuD; ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D); K13208 ELAV like protein 2/3/4 2.0e-12
C-terminus

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain