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Assembly Name: Hypothalamus m-wt v1.0

Name: tRNA binding

Term: GO:0000049  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
hpt_m_wt_v1.0_unigene3266 Hypothalamus m-wt v1.0 417
FL-Next: tr=Yars protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Tyrosyl-tRNA synthetase 5.843e-09
AutoFact: Tyrosyl-tRNA synthetase (Fragment) n=1 Tax=Ictalurus punctatus RepID=Q2EGP2_ICTPU 2.0e-10
C-terminus
hpt_m_wt_v1.0_unigene3775 Hypothalamus m-wt v1.0 308
FL-Next: tr=Cysteinyl-tRNA synthetase, cytoplasmic; Salmo salar (Atlantic salmon). 0.0
Sma3: Cysteinyl-tRNA synthetase 5.034e-17
AutoFact: cars, sb:cb71; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] 4.0e-26
C-terminus
hpt_m_wt_v1.0_unigene4212 Hypothalamus m-wt v1.0 255
FL-Next: tr=Multisynthetase complex auxiliary component p43; Anoplopoma fimbria (Sablefish). 0.0
Sma3: Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 3.093e-14
AutoFact: Multisynthetase complex auxiliary component p43 n=1 Tax=Anoplopoma fimbria RepID=C3KIH3_ANOFI 5.0e-24
Internal
hpt_m_wt_v1.0_unigene10110 Hypothalamus m-wt v1.0 431
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: tRNA wybutosine-synthesizing protein 5 8.506e-11
AutoFact: MGC154110, im:7148946, m:7148946; zgc:154110 0.0
Internal
hpt_m_wt_v1.0_unigene16175 Hypothalamus m-wt v1.0 258
FL-Next: tr=Multisynthetase complex auxiliary component p43; Anoplopoma fimbria (Sablefish). 0.0
Sma3: Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 9.311e-15
AutoFact: Multisynthetase complex auxiliary component p43 n=1 Tax=Anoplopoma fimbria RepID=C3KIH3_ANOFI 6.0e-15
C-terminus
hpt_m_wt_v1.0_unigene20823 Hypothalamus m-wt v1.0 163
FL-Next: tr=Multisynthetase complex auxiliary component p43; Anoplopoma fimbria (Sablefish). 0.0
Sma3: Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 1.096e-19
AutoFact: Multisynthetase complex auxiliary component p43 n=1 Tax=Anoplopoma fimbria RepID=C3KIH3_ANOFI 2.0e-15
N-terminus
hpt_m_wt_v1.0_unigene21611 Hypothalamus m-wt v1.0 140
FL-Next: tr=Chromosome 3 SCAF14553, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: PheRS 1.623e-19
AutoFact: farsa, MGC158185, farsla, wu:fj21a11, zgc:136506, zgc:158185; phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] 3.0e-19
Internal
hpt_m_wt_v1.0_unigene24551 Hypothalamus m-wt v1.0 303
FL-Next: tr=Uncharacterized protein; Xenopus tropicalis (Western clawed frog) (Silurana tropicalis). 0.0
AutoFact: eif2ak4, GCN2; eukaryotic translation initiation factor 2 alpha kinase 4; K08860 eukaryotic translation initiation factor 2-alpha kinase [EC:2.7.11.1] 7.0e-33
Internal

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain