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Assembly Name: Hypothalamus m-wt v1.0

Name: G-patch domain

Term: IPR000467  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
hpt_m_wt_v1.0_unigene212 Hypothalamus m-wt v1.0 426
FL-Next: tr=NF-kappa-B-repressing factor; Salmo salar (Atlantic salmon). 0.0
Sma3: NFKB repressing factor 6.712e-10
AutoFact: NF-kappa-B-repressing factor n=1 Tax=Salmo salar RepID=C0H916_SALSA 4.06377e-44
C-terminus
hpt_m_wt_v1.0_unigene963 Hypothalamus m-wt v1.0 503
FL-Next: tr=RNA-binding protein 5; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
Sma3: RNA-binding protein 5 2.741e-18
AutoFact: RNA-binding protein 5 n=1 Tax=Dicentrarchus labrax RepID=E6ZG65_DICLA 0.0
Internal
hpt_m_wt_v1.0_unigene2033 Hypothalamus m-wt v1.0 309
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: LOC565404 protein 8.06e-06
AutoFact: gpatch8, fa12a04, gpatc8, wu:fa12a04; G patch domain containing 8 2.0e-16
N-terminus
hpt_m_wt_v1.0_unigene3420 Hypothalamus m-wt v1.0 628
FL-Next: tr=STIP; Gasterosteus aculeatus (Three-spined stickleback). 0.0
Sma3: STIP 7.999e-20
AutoFact: STIP n=1 Tax=Gasterosteus aculeatus RepID=A1XDA1_GASAC 0.0
C-terminus
hpt_m_wt_v1.0_unigene4589 Hypothalamus m-wt v1.0 255
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Splicing factor 4 8.371e-06
AutoFact: PREDICTED: SURP and G-patch domain-containing protein 1-like, partial n=1 Tax=Anolis carolinensis RepID=UPI000203B787 7.0e-39
Internal
hpt_m_wt_v1.0_unigene5688 Hypothalamus m-wt v1.0 182
FL-Next: tr=SR-related CTD associated factor 6; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Calcium homeostasis endoplasmic reticulum protein 4.422e-09
AutoFact: Cherp protein n=8 Tax=Danio rerio RepID=B7ZVL5_DANRE 1.0e-12
Internal
hpt_m_wt_v1.0_unigene7053 Hypothalamus m-wt v1.0 511
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Uncharacterized protein 0.0
AutoFact: ccdc75, zgc:92714; coiled-coil domain containing 75 0.0
N-terminus
hpt_m_wt_v1.0_unigene10078 Hypothalamus m-wt v1.0 196
FL-Next: tr=STIP; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: STIP 7.999e-20
AutoFact: Tuftelin-interacting protein 11 n=1 Tax=Salmo salar RepID=C0HBA0_SALSA 4.0e-29
Internal
hpt_m_wt_v1.0_unigene11318 Hypothalamus m-wt v1.0 369
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: G patch domain-containing protein 4 7.401e-11
AutoFact: LOC555692 protein (Fragment) n=4 Tax=Danio rerio RepID=A3KNR9_DANRE 2.0e-25
N-terminus
hpt_m_wt_v1.0_unigene12555 Hypothalamus m-wt v1.0 445
FL-Next: tr=RNA binding motif protein 17; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: RNA binding motif protein 17 1.894e-09
AutoFact: RNA binding motif protein 17 n=1 Tax=Danio rerio RepID=Q7ZVN6_DANRE 2.8026e-45
Internal
hpt_m_wt_v1.0_unigene12841 Hypothalamus m-wt v1.0 176
FL-Next: tr=RNA binding motif protein 17; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: RNA binding motif protein 17 1.691e-09
AutoFact: RNA binding motif protein 17 n=1 Tax=Danio rerio RepID=Q7ZVN6_DANRE 9.0e-05
Internal
hpt_m_wt_v1.0_unigene13893 Hypothalamus m-wt v1.0 323
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: LOC565404 protein 6.372e-11
AutoFact: gpatch8, fa12a04, gpatc8, wu:fa12a04; G patch domain containing 8 1.0e-25
Internal
hpt_m_wt_v1.0_unigene16342 Hypothalamus m-wt v1.0 379
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: T54 protein-like 4.974e-11
AutoFact: t54l, MGC152714, gpkow, mp:zf637-1-001655, si:dz150f13.5, wu:fb38d03, zgc:152714; T54 protein-like; K13101 G patch domain and KOW motifs-containing protein 5.0e-18
Putative N-terminus
hpt_m_wt_v1.0_unigene16440 Hypothalamus m-wt v1.0 171
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: MGC78780 protein 8.836e-06
AutoFact: Gpatch3, Gpatc3, RGD1311216; G patch domain containing 3 9.0e-23
Internal
hpt_m_wt_v1.0_unigene16844 Hypothalamus m-wt v1.0 151
Sma3: Splicing factor 4 8.681e-06
unknown
hpt_m_wt_v1.0_unigene18876 Hypothalamus m-wt v1.0 256
FL-Next: tr=RNA-binding protein 5; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
Sma3: RNA-binding protein 5 1.122e-13
AutoFact: RNA-binding protein 5 n=1 Tax=Dicentrarchus labrax RepID=E6ZG65_DICLA 3.0e-27
Internal
hpt_m_wt_v1.0_unigene19528 Hypothalamus m-wt v1.0 197
FL-Next: tr=Pin2-interacting protein X1; Esox lucius (Northern pike). 0.0
Sma3: Shelterin accessory factor 8.506e-11
AutoFact: Pin2/trf1-interacting protein 1 n=6 Tax=Danio rerio RepID=Q5RHK8_DANRE 6.0e-20
Putative N-terminus

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain