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Assembly Name: Hypothalamus m-wt v1.0

Name: Reverse transcriptase domain

Term: IPR000477  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
hpt_m_wt_v1.0_unigene1263 Hypothalamus m-wt v1.0 331
FL-Next: tr=ReO_6 protein; Oryzias latipes (Medaka fish) (Japanese ricefish). 0.0
Sma3: ReO_6 protein 9.766e-06
AutoFact: DUF1891 domain containing protein 9.0e-12
Internal
hpt_m_wt_v1.0_unigene1613 Hypothalamus m-wt v1.0 479
FL-Next: tr=Reverse transcriptase-like protein; Paralichthys olivaceus (Japanese flounder) (Hippoglossus olivaceus). 0.0
Sma3: Reverse transcriptase-like protein 2.119e-10
AutoFact: Reverse transcriptase-like protein n=1 Tax=Paralichthys olivaceus RepID=Q7T271_PAROL 1.0e-15
Putative C-terminus
hpt_m_wt_v1.0_unigene4413 Hypothalamus m-wt v1.0 293
FL-Next: tr=Reverse transcriptase-like protein; Paralichthys olivaceus (Japanese flounder) (Hippoglossus olivaceus). 0.0
Sma3: Reverse transcriptase-like protein 2.034e-15
AutoFact: Reverse transcriptase-like protein n=1 Tax=Paralichthys olivaceus RepID=Q7T271_PAROL 3.0e-18
Putative C-terminus
hpt_m_wt_v1.0_unigene4919 Hypothalamus m-wt v1.0 357
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: PREDICTED: retrotransposable element Tf2 155 kDa protein type 1-like n=3 Tax=Danio rerio RepID=UPI00020273A2 2.0e-14
Internal
hpt_m_wt_v1.0_unigene9831 Hypothalamus m-wt v1.0 303
FL-Next: tr=Uncharacterized protein; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
Sma3: Reverse transcriptase-like protein 6.358e-10
AutoFact: Reverse transcriptase-like protein n=1 Tax=Paralichthys olivaceus RepID=Q7T271_PAROL 4.0e-15
C-terminus
hpt_m_wt_v1.0_unigene10445 Hypothalamus m-wt v1.0 397
FL-Next: tr=Reverse transcriptase-like protein; Paralichthys olivaceus (Japanese flounder) (Hippoglossus olivaceus). 0.0
Sma3: Reverse transcriptase-like protein 8.916e-16
AutoFact: Reverse transcriptase-like protein n=1 Tax=Paralichthys olivaceus RepID=Q7T271_PAROL 9.0e-18
C-terminus
hpt_m_wt_v1.0_unigene12200 Hypothalamus m-wt v1.0 200
FL-Next: tr=Reverse transcriptase-like protein; Paralichthys olivaceus (Japanese flounder) (Hippoglossus olivaceus). 0.0
Sma3: Reverse transcriptase-like protein 2.785e-10
AutoFact: Reverse transcriptase-like protein n=1 Tax=Paralichthys olivaceus RepID=Q7T271_PAROL 2.0e-13
Internal
hpt_m_wt_v1.0_unigene12896 Hypothalamus m-wt v1.0 209
FL-Next: tr=Uncharacterized protein; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
Sma3: Reverse transcriptase-like protein 2.119e-10
AutoFact: Reverse transcriptase-like protein n=1 Tax=Paralichthys olivaceus RepID=Q7T271_PAROL 1.0e-18
Internal
hpt_m_wt_v1.0_unigene13166 Hypothalamus m-wt v1.0 365
FL-Next: tr=Reverse transcriptase-like protein; Paralichthys olivaceus (Japanese flounder) (Hippoglossus olivaceus). 0.0
Sma3: Reverse transcriptase-like protein 5.58e-19
AutoFact: Reverse transcriptase-like protein n=1 Tax=Paralichthys olivaceus RepID=Q7T271_PAROL 0.0
Internal
hpt_m_wt_v1.0_unigene17153 Hypothalamus m-wt v1.0 382
FL-Next: tr=ReO_6 protein; Oryzias latipes (Medaka fish) (Japanese ricefish). 0.0
Sma3: ReO_6 protein 3.41e-06
AutoFact: RVT_1 domain containing protein 1.0e-11
Internal
hpt_m_wt_v1.0_unigene17772 Hypothalamus m-wt v1.0 207
FL-Next: tr=Pol-like protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: Pol-like protein n=1 Tax=Danio rerio RepID=Q76IM1_DANRE 6.0e-20
Internal
hpt_m_wt_v1.0_unigene21815 Hypothalamus m-wt v1.0 281
FL-Next: tr=CR1-3; Rhigophila dearborni (Antarctic eelpout) (Lycodichthys dearborni). 0.0
Sma3: CR1-3 2.945e-06
AutoFact: Unassigned protein
Internal
hpt_m_wt_v1.0_unigene21996 Hypothalamus m-wt v1.0 182
FL-Next: tr=Pol polyprotein; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
Sma3: Pol polyprotein 1.571e-14
AutoFact: Pol polyprotein n=1 Tax=Dicentrarchus labrax RepID=E6ZI68_DICLA 5.0e-14
Putative C-terminus
hpt_m_wt_v1.0_unigene23559 Hypothalamus m-wt v1.0 377
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: ORF2-encoded protein 3.875e-06
AutoFact: similar to reverse transcriptase-like protein 6.0e-14
Internal

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain