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Assembly Name: Hypothalamus m-wt v1.0

Name: Zinc finger, C2H2

Term: IPR007087  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
hpt_m_wt_v1.0_unigene46 Hypothalamus m-wt v1.0 544
Sma3: ZXD family zinc finger C 7.595e-06
AutoFact: PREDICTED: zinc finger protein ZXDC n=1 Tax=Danio rerio RepID=UPI0000F1E404 3.0e-28
coding
hpt_m_wt_v1.0_unigene93 Hypothalamus m-wt v1.0 581
FL-Next: tr=Activity-dependent neuroprotector homeobox protein; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
AutoFact: Activity-dependent neuroprotector homeobox protein n=1 Tax=Dicentrarchus labrax RepID=E6ZFR1_DICLA 0.0
C-terminus
hpt_m_wt_v1.0_unigene112 Hypothalamus m-wt v1.0 489
FL-Next: tr=Juxtaposed with another zinc finger protein 1; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
Sma3: Juxtaposed with another zinc finger protein 1 1.406e-10
AutoFact: Juxtaposed with another zinc finger protein 1 n=2 Tax=Clupeocephala RepID=Q1KL18_TAKRU 2.94273e-44
C-terminus
hpt_m_wt_v1.0_unigene736 Hypothalamus m-wt v1.0 291
FL-Next: tr=Novel protein similar to vertebrate zinc finger and BTB domain containing 8 (ZBTB8); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: similar to hCG1788238; K10495 zinc finger and BTB domain-containing protein 8 4.0e-38
Internal
hpt_m_wt_v1.0_unigene801 Hypothalamus m-wt v1.0 326
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Zinc finger protein ZIC 1 2.774e-17
AutoFact: Zinc finger protein ZIC 1 (Fragment) n=1 Tax=Dicentrarchus labrax RepID=E6ZIX4_DICLA 0.0
Internal
hpt_m_wt_v1.0_unigene963 Hypothalamus m-wt v1.0 503
FL-Next: tr=RNA-binding protein 5; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
Sma3: RNA-binding protein 5 2.741e-18
AutoFact: RNA-binding protein 5 n=1 Tax=Dicentrarchus labrax RepID=E6ZG65_DICLA 0.0
Internal
hpt_m_wt_v1.0_unigene966 Hypothalamus m-wt v1.0 507
FL-Next: tr=Transcription factor YY1; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Yy1a protein 9.611e-06
AutoFact: Transcriptional repressor protein YY1 n=7 Tax=Theria RepID=TYY1_MOUSE 0.0
C-terminus
hpt_m_wt_v1.0_unigene1501 Hypothalamus m-wt v1.0 365
FL-Next: tr=Novel protein similar to vertebrate sal-like family; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: PREDICTED: LOW QUALITY PROTEIN: sal-like protein 3-like n=1 Tax=Ailuropoda melanoleuca RepID=UPI0001DEB265 1.0e-39
C-terminus
hpt_m_wt_v1.0_unigene2936 Hypothalamus m-wt v1.0 339
FL-Next: tr=Chromosome 18 SCAF15030, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
AutoFact: Zbtb5; zinc finger and BTB domain containing 5; K10492 zinc finger and BTB domain-containing protein 5 1.0e-35
Putative C-terminus
hpt_m_wt_v1.0_unigene2997 Hypothalamus m-wt v1.0 252
AutoFact: Unassigned protein
coding
hpt_m_wt_v1.0_unigene3262 Hypothalamus m-wt v1.0 382
FL-Next: tr=RNA-binding protein 6; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
Sma3: RNA-binding protein 6 5.58e-06
AutoFact: Innate_immun domain containing protein 6.0e-05
N-terminus
hpt_m_wt_v1.0_unigene3657 Hypothalamus m-wt v1.0 178
FL-Next: tr=Insulinoma-associated protein 1; Salmo salar (Atlantic salmon). 0.0
AutoFact: Insm1; insulinoma-associated 1 6.0e-11
C-terminus
hpt_m_wt_v1.0_unigene3815 Hypothalamus m-wt v1.0 332
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Zinc finger RNA-binding protein 1.83e-14
AutoFact: zfr, hnrpa1, wu:fb25b08, zgc:66235, zgc:66403; zinc finger RNA binding protein; K13203 zinc finger RNA-binding protein 8.0e-08
C-terminus
hpt_m_wt_v1.0_unigene4205 Hypothalamus m-wt v1.0 326
FL-Next: tr=Zinc finger homeobox protein 4; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
Sma3: Zinc finger homeobox protein 4 1.965e-17
AutoFact: Zinc finger homeobox protein 4 n=1 Tax=Dicentrarchus labrax RepID=E6ZIG4_DICLA 0.0
Internal
hpt_m_wt_v1.0_unigene4321 Hypothalamus m-wt v1.0 280
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: PREDICTED: similar to novel KRAB box and zinc finger, C2H2 type domain containing protein n=1 Tax=Equus caballus RepID=UPI000179636B 3.0e-17
C-terminus
hpt_m_wt_v1.0_unigene4436 Hypothalamus m-wt v1.0 257
Sma3: Zinc finger protein ZIC 1 1.735e-12
putative_coding
hpt_m_wt_v1.0_unigene4964 Hypothalamus m-wt v1.0 218
FL-Next: tr=Scratch-a transcription factor; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Snail homolog 2 (Drosophila) 1.556e-09
AutoFact: Zgc:162551 n=2 Tax=Danio rerio RepID=A4IGB7_DANRE 7.0e-32
C-terminus
hpt_m_wt_v1.0_unigene5310 Hypothalamus m-wt v1.0 346
FL-Next: tr=Chromosome 10 SCAF15019, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: Yy1a protein 9.611e-06
AutoFact: Yy1-a protein n=2 Tax=Xenopus laevis RepID=Q6DDI1_XENLA 2.0e-34
Internal
hpt_m_wt_v1.0_unigene6006 Hypothalamus m-wt v1.0 386
FL-Next: tr=Zinc finger homeobox protein 4; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
Sma3: Zinc finger homeobox protein 4 1.035e-17
AutoFact: Zinc finger homeobox protein 4 n=1 Tax=Dicentrarchus labrax RepID=E6ZIG4_DICLA 0.0
Internal
hpt_m_wt_v1.0_unigene6171 Hypothalamus m-wt v1.0 235
FL-Next: tr=B-cell CLL/lymphoma 11A; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: B-cell CLL/lymphoma 11B (zinc finger protein) 1.147e-09
AutoFact: bcl11a, MGC136898, wu:fi09f10, zgc:136898; B-cell CLL/lymphoma 11A 4.00001e-40
Putative C-terminus

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain