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Assembly Name: Hypophysis fwt v1.0

Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
hpp_fwt_v1.0_unigene6 Hypophysis fwt v1.0 400
FL-Next: tr=WD repeat-containing protein 82; Salmo salar (Atlantic salmon). 0.0
Sma3: WD repeat-containing protein 82 1.401e-21
AutoFact: WD repeat-containing protein 82 n=2 Tax=Neognathi RepID=C1BZS2_ESOLU 1.0e-18
N-terminus
hpp_fwt_v1.0_unigene414 Hypophysis fwt v1.0 1012
FL-Next: tr=Embryonic ectoderm development protein; Oryzias latipes (Medaka fish) (Japanese ricefish). 0.0
Sma3: Polycomb protein eed 2.284e-10
AutoFact: Polycomb protein eed n=1 Tax=Danio rerio RepID=EED_DANRE 0.0
C-terminus
hpp_fwt_v1.0_unigene420 Hypophysis fwt v1.0 335
FL-Next: Isoform 2 of Autophagy-related protein 16 OS=Xenopus tropicalis GN=atg16 0.0
Sma3: ATG16 autophagy related 16-like 1 (S. cerevisiae) 4.801e-09
AutoFact: PREDICTED: autophagy-related protein 16-2-like, partial n=1 Tax=Danio rerio RepID=UPI000202781D 4.0e-25
C-terminus
hpp_fwt_v1.0_unigene641 Hypophysis fwt v1.0 456
FL-Next: tr=WD repeat and SOF domain-containing protein 1; Salmo salar (Atlantic salmon). 0.0
Sma3: WD repeat and SOF domain-containing protein 1 2.148e-18
AutoFact: WD repeat and SOF domain-containing protein 1 n=2 Tax=Salmo salar RepID=B5X116_SALSA 0.0
C-terminus
hpp_fwt_v1.0_unigene676 Hypophysis fwt v1.0 722
FL-Next: tr=Pleiotropic regulator 1; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Pleiotropic regulator 1 4.803e-09
AutoFact: Pleiotropic regulator 1 n=15 Tax=Amniota RepID=PLRG1_BOVIN 0.0
Putative C-terminus
hpp_fwt_v1.0_unigene821 Hypophysis fwt v1.0 333
FL-Next: sp=Ribosome biogenesis protein wdr12; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Ribosome biogenesis protein wdr12 6.119e-15
AutoFact: Ribosome biogenesis protein wdr12 n=1 Tax=Danio rerio RepID=WDR12_DANRE 3.0e-21
C-terminus
hpp_fwt_v1.0_unigene905 Hypophysis fwt v1.0 788
FL-Next: tr=Chromosome 17 SCAF14597, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: WD repeat-containing protein 92 1.877e-14
AutoFact: WD repeat-containing protein 92 n=1 Tax=Ictalurus furcatus RepID=E3TBU7_9TELE 7.0e-32
C-terminus
hpp_fwt_v1.0_unigene1214 Hypophysis fwt v1.0 649
FL-Next: sp=Katanin p80 WD40-containing subunit B1; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Katanin p80 WD40-containing subunit B1 2.142e-13
AutoFact: katnb1, wu:fj32f02, wu:fj65h01, zgc:56071; katanin p80 (WD repeat containing) subunit B 1 0.0
C-terminus
hpp_fwt_v1.0_unigene1359 Hypophysis fwt v1.0 398
FL-Next: tr=U3 small nucleolar RNA-associated protein 15 homolog; Salmo salar (Atlantic salmon). 0.0
Sma3: U3 small nucleolar RNA-associated protein 15 homolog 1.062e-09
AutoFact: U3 small nucleolar RNA-associated protein 15 homolog n=1 Tax=Salmo salar RepID=B5X2W0_SALSA 6.0e-22
C-terminus
hpp_fwt_v1.0_unigene2264 Hypophysis fwt v1.0 716
FL-Next: tr=Transducin (Beta)-like 2; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Transducin (beta)-like 2 1.635e-10
AutoFact: Tbl2 protein n=3 Tax=Xenopus RepID=Q66JB8_XENTR 0.0
C-terminus
hpp_fwt_v1.0_unigene2295 Hypophysis fwt v1.0 804
FL-Next: tr=WD repeat-containing protein 24; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
Sma3: WD repeat-containing protein 24 1.341e-10
AutoFact: WD repeat-containing protein 24 n=3 Tax=Xenopus RepID=WDR24_XENLA 3.0e-06
Putative C-terminus
hpp_fwt_v1.0_unigene2453 Hypophysis fwt v1.0 772
FL-Next: tr=TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor n=3 Tax=Danio rerio RepID=B8JIQ0_DANRE 0.0
Internal
hpp_fwt_v1.0_unigene2698 Hypophysis fwt v1.0 262
FL-Next: sp=Protein transport protein Sec31A; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Protein transport protein Sec31A 2.282e-13
AutoFact: sec31a, cb354, sec31p, zgc:63547; sec31 homolog A (S. cerevisiae); K14005 protein transport protein SEC31 2.0e-34
C-terminus
hpp_fwt_v1.0_unigene2775 Hypophysis fwt v1.0 447
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Guanine nucleotide binding protein (G protein), beta 5 6.276e-14
AutoFact: Guanine nucleotide-binding protein subunit beta-5 n=28 Tax=Euteleostomi RepID=GBB5_HUMAN 1.0e-33
N-terminus
hpp_fwt_v1.0_unigene2956 Hypophysis fwt v1.0 737
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Cleavage stimulation factor, 3' pre-RNA, subunit 1 1.07e-09
AutoFact: Cleavage stimulation factor subunit 1 n=34 Tax=Euteleostomi RepID=CSTF1_HUMAN 0.0
N-terminus
hpp_fwt_v1.0_unigene3470 Hypophysis fwt v1.0 1041
FL-Next: tr=Prolactin regulatory element-binding protein; Salmo salar (Atlantic salmon). 0.0
AutoFact: sb:cb385, wu:fj59h11; zgc:92203; K14003 prolactin regulatory element-binding protein 0.0
C-terminus
hpp_fwt_v1.0_unigene3656 Hypophysis fwt v1.0 407
FL-Next: sp=Lissencephaly-1 homolog A; Salmo salar (Atlantic salmon). 0.0
Sma3: Lissencephaly-1 homolog B 8.091e-10
AutoFact: PREDICTED: platelet-activating factor acetylhydrolase IB subunit alpha-like n=1 Tax=Nomascus leucogenys RepID=UPI00020AE660 5.0e-39
Internal
hpp_fwt_v1.0_unigene4068 Hypophysis fwt v1.0 1370
FL-Next: tr=Eukaryotic translation initiation factor 3 subunit 2; Osmerus mordax (Rainbow smelt) (Atherina mordax). 0.0
Sma3: Chromosome 21 SCAF14577, whole genome shotgun sequence. 0.0
AutoFact: Eukaryotic translation initiation factor 3 subunit I n=9 Tax=Clupeocephala RepID=EIF3I_DANRE 0.0
Complete
hpp_fwt_v1.0_unigene4099 Hypophysis fwt v1.0 461
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: kinesin family member 21A-like; K10395 kinesin family member 4/7/21/27 0.0
Internal
hpp_fwt_v1.0_unigene4168 Hypophysis fwt v1.0 391
FL-Next: sp=Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Protein phosphatase 2, regulatory subunit B, alpha 2.935e-09
AutoFact: Protein phosphatase 2, regulatory subunit B, delta isoform, isoform CRA_b n=3 Tax=Eutheria RepID=A8MZB4_HUMAN 1.0e-32
C-terminus

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain