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Assembly Name: Hypophysis fwt v1.0

Name: G-protein beta WD-40 repeat

Term: IPR020472  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
hpp_fwt_v1.0_unigene6 Hypophysis fwt v1.0 400
FL-Next: tr=WD repeat-containing protein 82; Salmo salar (Atlantic salmon). 0.0
Sma3: WD repeat-containing protein 82 1.401e-21
AutoFact: WD repeat-containing protein 82 n=2 Tax=Neognathi RepID=C1BZS2_ESOLU 1.0e-18
N-terminus
hpp_fwt_v1.0_unigene160 Hypophysis fwt v1.0 616
FL-Next: tr=Novel protein similar to vertebrate WD repeat domain 44 (WDR44); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: novel protein similar to vertebrate WD repeat domain 44 (WDR44) 2.0e-18
C-terminus
hpp_fwt_v1.0_unigene420 Hypophysis fwt v1.0 335
FL-Next: Isoform 2 of Autophagy-related protein 16 OS=Xenopus tropicalis GN=atg16 0.0
Sma3: ATG16 autophagy related 16-like 1 (S. cerevisiae) 4.801e-09
AutoFact: PREDICTED: autophagy-related protein 16-2-like, partial n=1 Tax=Danio rerio RepID=UPI000202781D 4.0e-25
C-terminus
hpp_fwt_v1.0_unigene676 Hypophysis fwt v1.0 722
FL-Next: tr=Pleiotropic regulator 1; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Pleiotropic regulator 1 4.803e-09
AutoFact: Pleiotropic regulator 1 n=15 Tax=Amniota RepID=PLRG1_BOVIN 0.0
Putative C-terminus
hpp_fwt_v1.0_unigene821 Hypophysis fwt v1.0 333
FL-Next: sp=Ribosome biogenesis protein wdr12; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Ribosome biogenesis protein wdr12 6.119e-15
AutoFact: Ribosome biogenesis protein wdr12 n=1 Tax=Danio rerio RepID=WDR12_DANRE 3.0e-21
C-terminus
hpp_fwt_v1.0_unigene1214 Hypophysis fwt v1.0 649
FL-Next: sp=Katanin p80 WD40-containing subunit B1; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Katanin p80 WD40-containing subunit B1 2.142e-13
AutoFact: katnb1, wu:fj32f02, wu:fj65h01, zgc:56071; katanin p80 (WD repeat containing) subunit B 1 0.0
C-terminus
hpp_fwt_v1.0_unigene2264 Hypophysis fwt v1.0 716
FL-Next: tr=Transducin (Beta)-like 2; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Transducin (beta)-like 2 1.635e-10
AutoFact: Tbl2 protein n=3 Tax=Xenopus RepID=Q66JB8_XENTR 0.0
C-terminus
hpp_fwt_v1.0_unigene2453 Hypophysis fwt v1.0 772
FL-Next: tr=TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor n=3 Tax=Danio rerio RepID=B8JIQ0_DANRE 0.0
Internal
hpp_fwt_v1.0_unigene2775 Hypophysis fwt v1.0 447
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Guanine nucleotide binding protein (G protein), beta 5 6.276e-14
AutoFact: Guanine nucleotide-binding protein subunit beta-5 n=28 Tax=Euteleostomi RepID=GBB5_HUMAN 1.0e-33
N-terminus
hpp_fwt_v1.0_unigene3656 Hypophysis fwt v1.0 407
FL-Next: sp=Lissencephaly-1 homolog A; Salmo salar (Atlantic salmon). 0.0
Sma3: Lissencephaly-1 homolog B 8.091e-10
AutoFact: PREDICTED: platelet-activating factor acetylhydrolase IB subunit alpha-like n=1 Tax=Nomascus leucogenys RepID=UPI00020AE660 5.0e-39
Internal
hpp_fwt_v1.0_unigene4699 Hypophysis fwt v1.0 589
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: dcaf11, MGC110066, wdr23, zgc:110066; ddb1 and cul4 associated factor 11; K11801 WD repeat-containing protein 23 0.0
C-terminus
hpp_fwt_v1.0_unigene5000 Hypophysis fwt v1.0 1197
FL-Next: tr=PWP1 homolog (S. cerevisiae); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: pwp1, MGC56486, zgc:56486; PWP1 homolog (S. cerevisiae) 0.0
C-terminus
hpp_fwt_v1.0_unigene5025 Hypophysis fwt v1.0 645
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Pleiotropic regulator 1 1.47e-13
AutoFact: Pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) n=4 Tax=Xenopus RepID=Q28IM0_XENTR 0.0
N-terminus
hpp_fwt_v1.0_unigene5628 Hypophysis fwt v1.0 789
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Guanine nucleotide binding protein (G protein), beta polypeptide 2 1.618e-09
AutoFact: Zgc:158678 n=1 Tax=Danio rerio RepID=A1L271_DANRE 6.0e-28
C-terminus
hpp_fwt_v1.0_unigene5815 Hypophysis fwt v1.0 743
FL-Next: tr=Chromosome 17 SCAF15006, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
AutoFact: strn; zgc:158357 6.0e-12
Putative C-terminus
hpp_fwt_v1.0_unigene5982 Hypophysis fwt v1.0 1273
FL-Next: tr=p21-activated protein kinase-interacting protein 1-like; Salmo salar (Atlantic salmon). 0.0
Sma3: Uncharacterized protein 0.0
AutoFact: [R] COG2319 FOG: WD40 repeat 7.0e-29
Putative Complete
hpp_fwt_v1.0_unigene6133 Hypophysis fwt v1.0 764
FL-Next: sp=WD repeat and SOCS box-containing protein 1; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: WSB-1 2.245e-14
AutoFact: WD repeat and SOCS box-containing protein 1 n=1 Tax=Danio rerio RepID=WSB1_DANRE 0.0
Internal
hpp_fwt_v1.0_unigene6199 Hypophysis fwt v1.0 1102
FL-Next: tr=Receptor for activated protein kinase C; Oreochromis mossambicus (Mozambique tilapia) (Tilapia mossambica). 0.0
Sma3: Receptor for activated protein kinase C 0.0
AutoFact: PREDICTED: LOW QUALITY PROTEIN: guanine nucleotide-binding protein subunit beta-2-like 1-like n=5 Tax=Amniota RepID=UPI0001D62689 0.0
Complete
hpp_fwt_v1.0_unigene6524 Hypophysis fwt v1.0 896
FL-Next: tr=Copa protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Coatomer protein complex, subunit alpha 7.81e-14
AutoFact: Coatomer subunit alpha n=2 Tax=Salmo salar RepID=B5X3T4_SALSA 0.0
C-terminus
hpp_fwt_v1.0_unigene6757 Hypophysis fwt v1.0 514
FL-Next: tr=Zgc:110281; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Notchless homolog 1 8.176e-10
AutoFact: Notchless protein homolog 1 (Fragment) n=3 Tax=Euteleostei RepID=C0PUL3_SALSA 1.4013e-45
C-terminus

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain