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Assembly Name: Hypophysis mj v1.0

Name: ubiquitin ligase complex

Term: GO:0000151  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
hpp_mj_v1.0_unigene606 Hypophysis mj v1.0 319
FL-Next: tr=PRP19/PSO4 homolog (S. cerevisiae); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Pre-mRNA-processing factor 19 5.515e-10
AutoFact: PRP19/PSO4-like protein-like (Fragment) n=1 Tax=Ictalurus punctatus RepID=Q1WCH2_ICTPU 2.0e-30
C-terminus
hpp_mj_v1.0_unigene2057 Hypophysis mj v1.0 306
FL-Next: tr=Peptidyl-prolyl cis-trans isomerase-like 2; Salmo salar (Atlantic salmon). 0.0
Sma3: Peptidylprolyl isomerase (cyclophilin)-like 2 2.91e-14
AutoFact: PPIL2; peptidylprolyl isomerase (cyclophilin)-like 2 (EC:5.2.1.8); K10598 peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8] 4.0e-11
C-terminus
hpp_mj_v1.0_unigene2248 Hypophysis mj v1.0 446
FL-Next: sp=E3 ubiquitin-protein ligase mib1; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: E3 ubiquitin-protein ligase mib1 5.588e-10
AutoFact: E3 ubiquitin-protein ligase mib1 n=6 Tax=Euteleostomi RepID=MIB1_DANRE 0.0
Internal
hpp_mj_v1.0_unigene2863 Hypophysis mj v1.0 341
FL-Next: tr=Chromosome 2 SCAF9897, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
AutoFact: similar to RanBP2 (Ran-binding protein 2) 5.99994e-41
C-terminus
hpp_mj_v1.0_unigene5329 Hypophysis mj v1.0 699
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
AutoFact: Peptidyl-prolyl cis-trans isomerase CWC27 homolog n=2 Tax=Danio rerio RepID=CWC27_DANRE 0.0
N-terminus
hpp_mj_v1.0_unigene5567 Hypophysis mj v1.0 703
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Branchiostoma floridae RepID=C3Z1U8_BRAFL 0.0
Complete
hpp_mj_v1.0_unigene7034 Hypophysis mj v1.0 710
FL-Next: tr=Peptidylprolyl isomerase (Cyclophilin)-like 2; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
AutoFact: Peptidylprolyl isomerase (Cyclophilin)-like 2 n=2 Tax=Danio rerio RepID=Q6IQJ6_DANRE 0.0
Internal
hpp_mj_v1.0_unigene7552 Hypophysis mj v1.0 338
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
AutoFact: UPI00016E84BB related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E84BB 0.0
Internal
hpp_mj_v1.0_unigene8242 Hypophysis mj v1.0 835
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
AutoFact: peptidylprolyl isomerase 0.0
Putative Complete
hpp_mj_v1.0_unigene11173 Hypophysis mj v1.0 398
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: WD repeat, SAM and U-box domain-containing protein 1 8.538e-10
AutoFact: wdsub1; zgc:154085 1.0e-36
N-terminus
hpp_mj_v1.0_unigene12247 Hypophysis mj v1.0 332
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: WD repeat, SAM and U-box domain-containing protein 1 8.268e-10
AutoFact: WD repeat, SAM and U-box domain-containing protein 1-like 3.0e-21
C-terminus
hpp_mj_v1.0_unigene15679 Hypophysis mj v1.0 471
FL-Next: tr=Pre-mRNA-processing factor 19; Salmo salar (Atlantic salmon). 0.0
Sma3: Pre-mRNA-processing factor 19 4.879e-10
AutoFact: prp19, NMP200, fb18f09, wu:fb18f09, zgc:56158; PRP19/PSO4 homolog (S. cerevisiae); K10599 pre-mRNA-processing factor 19 [EC:6.3.2.19] 0.0
Internal

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain