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Assembly Name: Hypophysis mj v1.0

Name: nucleotide binding

Term: GO:0000166  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
hpp_mj_v1.0_unigene67 Hypophysis mj v1.0 677
• FL-Next: tr=Peroxisomal trans-2-enoyl-CoA reductase; Salmo salar (Atlantic salmon). 0.0
• Sma3: Peroxisomal trans-2-enoyl-CoA reductase 1.096e-19
• AutoFact: Peroxisomal trans-2-enoyl-CoA reductase n=1 Tax=Salmo salar RepID=B5XAK8_SALSA 0.0
C-terminus
hpp_mj_v1.0_unigene114 Hypophysis mj v1.0 452
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: NEDD8-activating enzyme E1 regulatory subunit 6.732e-20
• AutoFact: Isoform 2 of NEDD8-activating enzyme E1 regulatory subunit n=1 Tax=Danio rerio RepID=Q7SXP2-2 0.0
C-terminus
hpp_mj_v1.0_unigene167 Hypophysis mj v1.0 1398
• FL-Next: tr=Zgc:153046; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Biliverdin reductase A 6.993e-10
• AutoFact: MGC153046; zgc:153046 (EC:1.3.1.24); K00214 biliverdin reductase [EC:1.3.1.24] 0.0
Complete
hpp_mj_v1.0_unigene191 Hypophysis mj v1.0 621
• FL-Next: tr=Chromosome undetermined SCAF10316, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
• Sma3: RNA-binding protein 4.1 6.51e-06
• AutoFact: rbm4.1, rbm4, rna-bp4, wu:fc31f07, wu:fc57h11, zgc:56302; RNA binding motif protein 4.1; K13187 RNA-binding protein 4 3.0e-12
C-terminus
hpp_mj_v1.0_unigene295 Hypophysis mj v1.0 1126
• FL-Next: tr=TAR DNA-binding protein 43; Osmerus mordax (Rainbow smelt) (Atherina mordax). 0.0
• Sma3: TAR DNA-binding protein 43 7.427e-23
• AutoFact: tardbpl, fb52e05, fj94b04, tardbp, wu:fb52e05, wu:fe47c11, wu:fj94b04; TAR DNA binding protein, like 0.0
C-terminus
hpp_mj_v1.0_unigene338 Hypophysis mj v1.0 855
• FL-Next: tr=3beta-hydroxysteroid dehydrogenase type II; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1.635e-10
• AutoFact: 3beta-hydroxysteroid dehydrogenase type II n=1 Tax=Oreochromis niloticus RepID=B9UN14_ORENI 0.0
C-terminus
hpp_mj_v1.0_unigene364 Hypophysis mj v1.0 1416
• FL-Next: tr=Glutamate dehydrogenase, mitochondrial; Salmo salar (Atlantic salmon). 0.0
• Sma3: Glutamate dehydrogenase 7.206e-27
• AutoFact: Glutamate dehydrogenase, mitochondrial n=12 Tax=Clupeocephala RepID=DHE3_CHAAC 0.0
C-terminus
hpp_mj_v1.0_unigene454 Hypophysis mj v1.0 353
• FL-Next: tr=TFZR1; Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri). 0.0
• Sma3: TFZR1 9.456e-06
• AutoFact: htatsf1, MGC66252, zgc:66252; HIV TAT specific factor 1; K13093 HIV Tat-specific factor 1 9.0e-20
Internal
hpp_mj_v1.0_unigene478 Hypophysis mj v1.0 476
• FL-Next: tr=FUS-interacting serine-arginine-rich protein 1; Salmo salar (Atlantic salmon). 0.0
• Sma3: Serine/arginine-rich splicing factor 12 3.374e-10
• AutoFact: MGC65772, zgc:77372; zgc:65772 0.0
N-terminus
hpp_mj_v1.0_unigene496 Hypophysis mj v1.0 218
• FL-Next: tr=Heterogeneous nuclear ribonucleoprotein R; Salmo salar (Atlantic salmon). 0.0
• Sma3: Heterogeneous nuclear ribonucleoprotein R 2.252e-13
• AutoFact: Heterogeneous nuclear ribonucleoprotein R n=35 Tax=Amniota RepID=HNRPR_HUMAN 4.0e-18
C-terminus
hpp_mj_v1.0_unigene551 Hypophysis mj v1.0 397
• FL-Next: tr=FUS-interacting serine-arginine-rich protein 1; Salmo salar (Atlantic salmon). 0.0
• Sma3: Serine/arginine-rich splicing factor 12 2.574e-10
• AutoFact: FUS-interacting serine-arginine-rich protein 1 n=1 Tax=Salmo salar RepID=B5X1S5_SALSA 0.0
N-terminus
hpp_mj_v1.0_unigene624 Hypophysis mj v1.0 317
• Sma3: Zgc:65772 protein 6.665e-06
• AutoFact: DUF1777 multi-domain protein 2.0e-12
coding
hpp_mj_v1.0_unigene654 Hypophysis mj v1.0 698
• FL-Next: tr=Si:dkey-174n20.1 protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Dehydrogenase/reductase SDR family member 13 4.891e-17
• AutoFact: MGC162294, fj39b10, wu:fj39b10; si:dkey-174n20.1 0.0
C-terminus
hpp_mj_v1.0_unigene708 Hypophysis mj v1.0 391
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Polyadenylate-binding protein 2 4.743e-10
• AutoFact: Pabpn1 protein n=7 Tax=Euteleostomi RepID=Q6NUT4_DANRE 3.0e-27
Internal
hpp_mj_v1.0_unigene810 Hypophysis mj v1.0 613
• FL-Next: tr=MKI67 FHA domain-interacting nucleolar phosphoprotein-like; Osmerus mordax (Rainbow smelt) (Atherina mordax). 0.0
• Sma3: MKI67 FHA domain-interacting nucleolar phosphoprotein-like 2.511e-18
• AutoFact: mki67ip, cb131, chunp6918, fb34b01, mki67ipl, sb:cb131, wu:fb34b01; mki67 (FHA domain) interacting nucleolar phosphoprotein (human) 1.0e-24
C-terminus
hpp_mj_v1.0_unigene840 Hypophysis mj v1.0 957
• FL-Next: tr=17-beta hydroxysteroid dehydrogenase type 8; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: 17-beta hydroxysteroid dehydrogenase type 8 0.0
• AutoFact: 17-beta hydroxysteroid dehydrogenase type 8 n=1 Tax=Oreochromis niloticus RepID=Q49RA9_ORENI 0.0
Complete
hpp_mj_v1.0_unigene849 Hypophysis mj v1.0 992
• FL-Next: tr=Poly A binding protein, cytoplasmic 1 a; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Poly(A) binding protein, cytoplasmic 1-like 1.49e-12
• AutoFact: pabpc1a, pabpc1, wu:fb16a02, wu:fi19b08, wu:fj12d09, wu:fj61f06, zgc:109879; poly A binding protein, cytoplasmic 1 a 0.0
C-terminus
hpp_mj_v1.0_unigene890 Hypophysis mj v1.0 472
• FL-Next: tr=Retinol dehydrogenase 12; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
• Sma3: Retinol dehydrogenase 12 1.062e-23
• AutoFact: Retinol dehydrogenase 12 n=1 Tax=Dicentrarchus labrax RepID=E6ZJA7_DICLA 0.0
Internal
hpp_mj_v1.0_unigene1180 Hypophysis mj v1.0 688
• FL-Next: tr=RNA-binding motif, single-stranded-interacting protein 1; Osmerus mordax (Rainbow smelt) (Atherina mordax). 0.0
• Sma3: RNA-binding motif, single-stranded-interacting protein 1 1.707e-09
• AutoFact: RNA-binding motif, single-stranded-interacting protein 1 n=1 Tax=Osmerus mordax RepID=C1BIU5_OSMMO 0.0
Internal
hpp_mj_v1.0_unigene1200 Hypophysis mj v1.0 381
• FL-Next: tr=Chromosome 3 SCAF14679, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
• AutoFact: similar to U2 small nuclear RNA auxiliary factor 2; K12837 splicing factor U2AF 65 kDa subunit 7.0e-12
Putative C-terminus

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain