SoleaDB

Assembly Name: Ovary f1 v1.0

Name: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Term: GO:0000184 Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence

Assembly

Length (nt)

Description

E-value

Full-Length

597

• FL-Next: sp=Nuclear cap-binding protein subunit 2; Siniperca chuatsi (Chinese perch).	0.0
• Sma3: CBP20	0.0
• AutoFact: Nuclear cap-binding protein subunit 2 n=1 Tax=Siniperca chuatsi RepID=NCBP2_SINCH	0.0

Complete

281

• FL-Next: sp=Protein SMG9; Salmo salar (Atlantic salmon).	0.0
• Sma3: Protein smg-9 homolog	1.337e-16
• AutoFact: Protein SMG9 n=1 Tax=Salmo salar RepID=SMG9_SALSA	3.0e-17

C-terminus

306

• FL-Next: sp=Putative regulator of nonsense transcripts 1; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes).	0.0
• AutoFact: PREDICTED: regulator of nonsense transcripts 1 n=1 Tax=Pan troglodytes RepID=UPI00020E4863	2.0e-09

N-terminus

399

• FL-Next: sp=Partner of Y14 and mago B; Salmo salar (Atlantic salmon).	0.0
• Sma3: Protein wibg homolog	4.442e-10
• AutoFact: Unassigned protein

C-terminus