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Assembly Name: Ovary f1 v1.0

Name: tRNA binding

Term: GO:0000049  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
ovary_f1_v1.0_unigene2689 Ovary f1 v1.0 195
FL-Next: tr=Cysteinyl-tRNA synthetase, cytoplasmic; Salmo salar (Atlantic salmon). 0.0
Sma3: Cysteinyl-tRNA synthetase 1.365e-21
AutoFact: cars, sb:cb71; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] 5.0e-13
Internal
ovary_f1_v1.0_unigene3734 Ovary f1 v1.0 387
FL-Next: tr=Multisynthetase complex auxiliary component p43; Anoplopoma fimbria (Sablefish). 0.0
Sma3: Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 1.257e-13
AutoFact: Multisynthetase complex auxiliary component p43 n=1 Tax=Anoplopoma fimbria RepID=C3KIH3_ANOFI 0.0
C-terminus
ovary_f1_v1.0_unigene4447 Ovary f1 v1.0 630
FL-Next: tr=ATP-binding domain-containing protein 3; Esox lucius (Northern pike). 0.0
Sma3: ATP-binding domain-containing protein 3 3.051e-14
AutoFact: Cytoplasmic tRNA 2-thiolation protein 1 n=3 Tax=Clupeocephala RepID=CTU1_DANRE 0.0
Putative Complete
ovary_f1_v1.0_unigene5334 Ovary f1 v1.0 1253
FL-Next: sp=Phenylalanyl-tRNA synthetase alpha chain; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: PheRS 3.041e-19
AutoFact: Phenylalanyl-tRNA synthetase alpha chain n=2 Tax=Danio rerio RepID=SYFA_DANRE 0.0
C-terminus
ovary_f1_v1.0_unigene8669 Ovary f1 v1.0 302
FL-Next: sp=Cytoplasmic tRNA 2-thiolation protein 1; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Cytoplasmic tRNA adenylyltransferase 1 1.012e-09
AutoFact: MGC55395, ctu1; zgc:55395 (EC:2.7.7.-); K14168 cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-] 0.0001
N-terminus
ovary_f1_v1.0_unigene9314 Ovary f1 v1.0 151
FL-Next: tr=Multisynthetase complex auxiliary component p43; Anoplopoma fimbria (Sablefish). 0.0
Sma3: Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 1.071e-14
AutoFact: Multisynthetase complex auxiliary component p43 n=1 Tax=Anoplopoma fimbria RepID=C3KIH3_ANOFI 4.0e-18
Internal
ovary_f1_v1.0_unigene10483 Ovary f1 v1.0 309
FL-Next: tr=Phenylalanyl-tRNA synthetase alpha chain; Salmo salar (Atlantic salmon). 0.0
Sma3: Phenylalanyl-tRNA synthetase alpha chain 7.595e-06
AutoFact: Phenylalanyl-tRNA synthetase alpha chain n=1 Tax=Salmo salar RepID=B5X2Q7_SALSA 6.0e-14
N-terminus
ovary_f1_v1.0_unigene12754 Ovary f1 v1.0 391
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Phenylalanyl-tRNA synthetase, mitochondrial 9.766e-06
AutoFact: Zgc:173439 protein (Fragment) n=3 Tax=Danio rerio RepID=A2RV45_DANRE 0.0
Putative N-terminus
ovary_f1_v1.0_unigene12897 Ovary f1 v1.0 103
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Cysteinyl-tRNA synthetase 4.431e-17
AutoFact: cars; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] 3.0e-09
Putative C-terminus
ovary_f1_v1.0_unigene14133 Ovary f1 v1.0 424
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Cytoplasmic tRNA 2-thiolation protein 2 1.228e-10
AutoFact: ctu2, ncs2, zgc:101113; cytosolic thiouridylase subunit 2 homolog (S. pombe); K14169 cytoplasmic tRNA 2-thiolation protein 2 4.0e-31
N-terminus
ovary_f1_v1.0_unigene14137 Ovary f1 v1.0 276
FL-Next: tr=Chromosome 7 SCAF14601, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
AutoFact: ferredoxin-fold anticodon binding domain containing 1 1.0e-05
N-terminus
ovary_f1_v1.0_unigene14788 Ovary f1 v1.0 409
FL-Next: sp=tRNA wybutosine-synthesizing protein 5; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: tRNA wybutosine-synthesizing protein 5 8.506e-11
AutoFact: MGC154110, im:7148946, m:7148946; zgc:154110 3.99931e-42
C-terminus

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain