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Assembly Name: Ovary f1 v1.0

Name: ribosome

Term: GO:0005840  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
ovary_f1_v1.0_unigene19 Ovary f1 v1.0 467
• FL-Next: tr=Mitochondrial 28S ribosomal protein S30; Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri). 0.0
• Sma3: Zgc:163093 protein 9.766e-06
• AutoFact: mitochondrial ribosomal protein S30-like 7.0e-37
Internal
ovary_f1_v1.0_unigene103 Ovary f1 v1.0 631
• FL-Next: sp=Ribosomal protein S27; Platichthys flesus (European flounder) (Pleuronectes flesus). 0.0
• Sma3: Ribosomal protein S27 0.0
• AutoFact: rps27.1, MGC122042; ribosomal protein S27.1; K02978 small subunit ribosomal protein S27e 1.0e-31
Putative Complete
ovary_f1_v1.0_unigene192 Ovary f1 v1.0 194
• FL-Next: sp=Ribosomal protein; Salmo salar (Atlantic salmon). 0.0
• Sma3: Ribosomal protein 8.048e-20
• AutoFact: mrpl36; si:dkey-261i16.3 9.0e-12
C-terminus
ovary_f1_v1.0_unigene210 Ovary f1 v1.0 265
• Sma3: Protein MAK16 homolog 1.228e-10
• AutoFact: Nop14 multi-domain protein 2.0e-08
coding
ovary_f1_v1.0_unigene317 Ovary f1 v1.0 604
• FL-Next: sp=Ribosomal protein L19; Solea senegalensis (Senegalese sole). 0.0
• Sma3: Ribosomal protein L19 0.0
• AutoFact: 60S ribosomal protein L19 n=56 Tax=Gnathostomata RepID=RL19_HUMAN 0.0
Complete
ovary_f1_v1.0_unigene353 Ovary f1 v1.0 1055
• FL-Next: tr=60S ribosomal protein L5; Salmo salar (Atlantic salmon). 0.0
• Sma3: 60S ribosomal protein L5 0.0
• AutoFact: 60S ribosomal protein L5 n=47 Tax=Sarcopterygii RepID=RL5_HUMAN 0.0
Complete
ovary_f1_v1.0_unigene426 Ovary f1 v1.0 1043
• FL-Next: tr=Ribosomal protein L9; Solea senegalensis (Senegalese sole). 0.0
• Sma3: Ribosomal protein L9 0.0
• AutoFact: 60S ribosomal protein L9 n=20 Tax=Euteleostomi RepID=RL9_ICTPU 0.0
Complete
ovary_f1_v1.0_unigene546 Ovary f1 v1.0 430
• FL-Next: tr=60S acidic ribosomal protein P2; Salmo salar (Atlantic salmon). 0.0
• Sma3: 60S acidic ribosomal protein P2 5.145e-39
• AutoFact: 60S acidic ribosomal protein P2 n=4 Tax=Salmoninae RepID=B5XEB4_SALSA 2.0e-24
Putative Complete
ovary_f1_v1.0_unigene777 Ovary f1 v1.0 607
• FL-Next: tr=Ribosomal protein L21; Solea senegalensis (Senegalese sole). 0.0
• Sma3: Ribosomal protein L21 0.0
• AutoFact: Ribosomal protein L21 n=9 Tax=Clupeocephala RepID=Q6IQQ0_DANRE 0.0
Putative Complete
ovary_f1_v1.0_unigene912 Ovary f1 v1.0 760
• FL-Next: tr=Ribosomal protein L32; Solea senegalensis (Senegalese sole). 0.0
• Sma3: Ribosomal protein L32 0.0
• AutoFact: Ribosomal protein L32 n=12 Tax=Euteleostei RepID=A9Z0N0_ONCMA 0.0
Complete
ovary_f1_v1.0_unigene918 Ovary f1 v1.0 330
• FL-Next: tr=Mitochondrial 39S ribosomal protein L3; Salmo salar (Atlantic salmon). 0.0
• Sma3: Mitochondrial 39S ribosomal protein L3 1.232e-14
• AutoFact: mrpl3, fj61d01, wu:fj61d01, zgc:66423; mitochondrial ribosomal protein L3 1.00053e-42
Internal
ovary_f1_v1.0_unigene987 Ovary f1 v1.0 753
• FL-Next: tr=28S ribosomal protein S7, mitochondrial; Salmo salar (Atlantic salmon). 0.0
• Sma3: 28S ribosomal protein S7, mitochondrial 0.0
• AutoFact: 28S ribosomal protein S7, mitochondrial n=5 Tax=Salmoninae RepID=B5X703_SALSA 0.0
Complete
ovary_f1_v1.0_unigene1141 Ovary f1 v1.0 663
• FL-Next: tr=40S ribosomal protein S18; Platichthys flesus (European flounder) (Pleuronectes flesus). 0.0
• Sma3: 40S ribosomal protein S18 0.0
• AutoFact: PREDICTED: 40S ribosomal protein S18-like isoform 1 n=1 Tax=Nomascus leucogenys RepID=UPI00020AD7D1 0.0
Complete
ovary_f1_v1.0_unigene1220 Ovary f1 v1.0 274
• FL-Next: tr=Chromosome 17 SCAF15006, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
• Sma3: 39S ribosomal protein L14, mitochondrial 7.391e-19
• AutoFact: 39S ribosomal protein L14, mitochondrial n=3 Tax=Euteleostei RepID=B5X998_SALSA 5.0e-38
C-terminus
ovary_f1_v1.0_unigene1438 Ovary f1 v1.0 622
• FL-Next: tr=Mitochondrial 28S ribosomal protein S33; Anoplopoma fimbria (Sablefish). 0.0
• Sma3: Mitochondrial 28S ribosomal protein S33 0.0
• AutoFact: Mitochondrial 28S ribosomal protein S33 n=1 Tax=Anoplopoma fimbria RepID=C3KJA7_ANOFI 2.0e-36
Complete
ovary_f1_v1.0_unigene1620 Ovary f1 v1.0 398
• FL-Next: tr=39S ribosomal protein L16, mitochondrial; Salmo salar (Atlantic salmon). 0.0
• Sma3: 39S ribosomal protein L16, mitochondrial 4.265e-14
• AutoFact: 39S ribosomal protein L16, mitochondrial n=2 Tax=Salmo salar RepID=B9EMS9_SALSA 9.0e-32
C-terminus
ovary_f1_v1.0_unigene1650 Ovary f1 v1.0 372
• FL-Next: tr=Chromosome 14 SCAF14660, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
• Sma3: Ribosomal protein S29 0.0
• AutoFact: PREDICTED: 40S ribosomal protein S29-like n=2 Tax=Simiiformes RepID=UPI0001D379BE 3.0e-28
Complete
ovary_f1_v1.0_unigene1683 Ovary f1 v1.0 551
• FL-Next: tr=Chromosome 1 SCAF14995, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
• Sma3: 39S ribosomal protein 54, mitochondrial 9.602e-11
• AutoFact: 39S ribosomal protein 54, mitochondrial n=2 Tax=Salmo salar RepID=B5X9A2_SALSA 4.0e-34
Complete
ovary_f1_v1.0_unigene1762 Ovary f1 v1.0 285
• FL-Next: tr=Mitochondrial 28S ribosomal protein S34; Esox lucius (Northern pike). 0.0
• Sma3: Mitochondrial 28S ribosomal protein S34 3.2e-10
• AutoFact: mrps34, MGC101877, fa19c10, wu:fa19c10, zgc:101877; mitochondrial ribosomal protein S34 1.0e-09
Putative C-terminus
ovary_f1_v1.0_unigene1960 Ovary f1 v1.0 578
• FL-Next: tr=40S ribosomal protein S15A; Paralichthys olivaceus (Japanese flounder) (Hippoglossus olivaceus). 0.0
• Sma3: 40S ribosomal protein S15A 0.0
• AutoFact: PREDICTED: ADP-ribosylation factor-like 6 interacting protein n=7 Tax=Amniota RepID=UPI000194D52E 0.0
Complete

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain