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Assembly Name: Immune System v1.0

Name: regulation of alternative mRNA splicing, via spliceosome

Term: GO:0000381  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
mmc_v1.0_unigene3137 Immune System v1.0 384
• FL-Next: Q08BY7 tr=Muscleblind-like (Drosophila); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• AutoFact: mbnl1, MGC153954, zgc:153954; muscleblind-like (Drosophila) 0.0
• Blast2go: muscleblind-like 1 isoform 5 0.0
Putative Complete
mmc_v1.0_unigene4062 Immune System v1.0 194
• FL-Next: Q08BY7 tr=Muscleblind-like (Drosophila); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• AutoFact: Unassigned protein
• Blast2go: muscleblind-like 1 isoform 5 6.93292e-21
Internal
mmc_v1.0_unigene8428 Immune System v1.0 677
• FL-Next: E6ZG64 tr=RNA-binding protein 5; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
• AutoFact: RNA-binding protein 5 n=1 Tax=Danio rerio RepID=UPI0001DD380D 0.0
• Blast2go: rna-binding protein 5 0.0
C-terminus
mmc_v1.0_unigene11470 Immune System v1.0 556
• FL-Next: F1QGH5 tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• AutoFact: rbm25, fi03e10, si:ch211-105d18.5, wu:fi03e10, zgc:56208; RNA binding motif protein 25; K12822 RNA-binding protein 25 0.0
• Blast2go: rna binding motif protein 25 0.0
N-terminus
mmc_v1.0_unigene11582 Immune System v1.0 221
• AutoFact: rbm5, wu:fc25a08, wu:fe06f12; RNA binding motif protein 5 0.0
• Blast2go: rna-binding protein 5 0.0
Unknown
mmc_v1.0_unigene18087 Immune System v1.0 329
• FL-Next: Q9IBD1 sp=CUGBP Elav-like family member 3; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• AutoFact: celf3, etr-1, etr1, tnrc4; cugbp, Elav-like family member 3; K13207 CUG-BP- and ETR3-like factor 0.0
• Blast2go: trinucleotide repeat containing 4 0.0
C-terminus
mmc_v1.0_unigene18449 Immune System v1.0 570
• FL-Next: E7F440 tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• AutoFact: rbm25, MGC69319, rnpc7, s164; RNA binding motif protein 25; K12822 RNA-binding protein 25 0.0
• Blast2go: rna binding motif protein 25 0.0
Putative C-terminus
mmc_v1.0_unigene20591 Immune System v1.0 278
• FL-Next: E7F293 tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• AutoFact: bruno-like 4, RNA binding protein-like 4.0e-38
• Blast2go: cugbp elav-like family member 3-like 2.09781e-38
C-terminus
mmc_v1.0_unigene26267 Immune System v1.0 431
• FL-Next: E7F440 tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• AutoFact: similar to RBM25 protein; K12822 RNA-binding protein 25 2.0e-34
• Blast2go: rna binding motif protein 25 1.95061e-36
C-terminus
mmc_v1.0_unigene26679 Immune System v1.0 928
• FL-Next: E6ZG65 tr=RNA-binding protein 5; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
• AutoFact: rbm5, wu:fc25a08, wu:fe06f12; RNA binding motif protein 5 0.0
• Blast2go: rna-binding protein 5 0.0
C-terminus
mmc_v1.0_unigene32917 Immune System v1.0 174
• FL-Next: E6ZG65 tr=RNA-binding protein 5; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
• AutoFact: RNA-binding protein 5 (Fragment) n=1 Tax=Salmo salar RepID=C0PU55_SALSA 2.0e-28
• Blast2go: rna-binding protein 5 2.52678e-28
Internal
mmc_v1.0_unigene36178 Immune System v1.0 299
• FL-Next: Q5RKP8 tr=Smx5; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• AutoFact: U6 snRNA-associated Sm-like protein LSm2 n=11 Tax=Coelomata RepID=LSM2_HUMAN 3.0e-24
• Blast2go: u6 snrna-associated sm-like protein lsm2 2.92109e-24
Putative Complete
mmc_v1.0_unigene38586 Immune System v1.0 559
• FL-Next: Q4SD66 tr=Chromosome 11 SCAF14642, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
• AutoFact: BRUNOL6; bruno-like 6, RNA binding protein (Drosophila); K13207 CUG-BP- and ETR3-like factor 1.0e-18
• Blast2go: brunol4 protein 3.12964e-18
Internal
mmc_v1.0_unigene42011 Immune System v1.0 621
• FL-Next: F1QGH5 tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• AutoFact: rbm25, fi03e10, si:ch211-105d18.5, wu:fi03e10, zgc:56208; RNA binding motif protein 25; K12822 RNA-binding protein 25 0.0
• Blast2go: rna binding motif protein 25 0.0
Internal
mmc_v1.0_unigene47495 Immune System v1.0 257
• FL-Next: E6ZG65 tr=RNA-binding protein 5; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
• AutoFact: rbm5, wu:fc25a08, wu:fe06f12; RNA binding motif protein 5 0.0
• Blast2go: rna-binding protein 5 0.0
Internal
mmc_v1.0_unigene49982 Immune System v1.0 234
• FL-Next: Q7ZV58 tr=RNA binding motif protein 25; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• AutoFact: rbm25, fi03e10, si:ch211-105d18.5, wu:fi03e10, zgc:56208; RNA binding motif protein 25; K12822 RNA-binding protein 25 0.0
• Blast2go: rna binding motif protein 25 0.0
Internal
mmc_v1.0_unigene52022 Immune System v1.0 248
• AutoFact: rbm25, fi03e10, si:ch211-105d18.5, wu:fi03e10, zgc:56208; RNA binding motif protein 25; K12822 RNA-binding protein 25 0.0
• Blast2go: rna binding motif protein 25 0.0
Unknown
mmc_v1.0_unigene75606 Immune System v1.0 157
• FL-Next: F1R633 tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• AutoFact: Brunol5 protein n=2 Tax=Danio rerio RepID=B3DJA7_DANRE 2.0e-32
• Blast2go: novel protein vertebrate bruno-like rna binding protein family 2.98195e-32
Internal
mmc_v1.0_unigene82027 Immune System v1.0 234
• FL-Next: Q4SPQ2 tr=Chromosome 16 SCAF14537, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
• AutoFact: MBNL1; muscleblind-like (Drosophila) 1.0e-18
• Blast2go: muscleblind-like 1 isoform 5 3.15833e-18
N-terminus
mmc_v1.0_unigene82837 Immune System v1.0 165
• FL-Next: E7FAE3 tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• AutoFact: MBNL1; muscleblind-like (Drosophila) 2.0e-18
• Blast2go: muscleblind-like 1 isoform 1 1.08595e-18
Internal

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain