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Assembly Name: Immune System v1.0

Name: promoter binding

Term: GO:0010843  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
mmc_v1.0_unigene23 Immune System v1.0 215
FL-Next: Q90424 tr=B-catenin; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: PREDICTED: catenin (cadherin-associated protein), beta 1, 88kDa isoform 2 n=1 Tax=Pan troglodytes RepID=UPI0000E1FC25 1.0e-27
Blast2go: catenin beta 1 1.27583e-27
Internal
mmc_v1.0_unigene1751 Immune System v1.0 285
FL-Next: E7FH14 tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: similar to histone deacetylase 5; K11406 histone deacetylase 4/5 [EC:3.5.1.98] 6.0e-16
Blast2go: histone deacetylase 5 8.60598e-16
Internal
mmc_v1.0_unigene2960 Immune System v1.0 289
FL-Next: Q7T192 tr=Beta-catenin; Carassius auratus (Goldfish). 0.0
AutoFact: Beta-catenin (Fragment) n=1 Tax=Oryctolagus cuniculus RepID=Q0PNE9_RABIT 6.0e-10
Blast2go: catenin beta-1 1.81854e-24
Internal
mmc_v1.0_unigene4355 Immune System v1.0 666
FL-Next: F1R9K9 tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: novel protein similar to vertebrate X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining\; Ku autoantigen, 80kDa) (XRCC5) [Danio rerio] 0.0
Blast2go: x-ray repair complementing defective repair in chinese hamster cells 5 0.0
Putative C-terminus
mmc_v1.0_unigene4600 Immune System v1.0 858
FL-Next: B8JIQ0 tr=TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: TBP-associated factor 5; K03130 transcription initiation factor TFIID subunit D4 0.0
Blast2go: transcription initiation factor tfiid subunit 5 0.0
C-terminus
mmc_v1.0_unigene4913 Immune System v1.0 304
FL-Next: Q8JID2 tr=Beta-catenin 2; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: PREDICTED: catenin (cadherin-associated protein), beta 1, 88kDa isoform 2 n=1 Tax=Pan troglodytes RepID=UPI0000E1FC25 7.0e-14
Blast2go: catenin beta-1 1.35497e-13
Internal
mmc_v1.0_unigene5592 Immune System v1.0 232
FL-Next: Q4SHF7 tr=Chromosome 5 SCAF14581, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
AutoFact: nr1h3, im:7141239, wu:fd59b01, zgc:113339, zgc:158542; nuclear receptor subfamily 1, group H, member 3; K08536 liver X receptor alpha 0.0
Blast2go: oxysterols receptor lxr-alpha 0.0
Internal
mmc_v1.0_unigene6001 Immune System v1.0 393
FL-Next: Q7ZU35 tr=MAD homolog 2 (Drosophila); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: TGF effector Smad2 (Fragment) n=4 Tax=Euteleostomi RepID=Q9I9P2_CHICK 0.0
Blast2go: smad family member 2 0.0
Internal
mmc_v1.0_unigene7112 Immune System v1.0 382
FL-Next: Q7ZUU9 tr=Retinoblastoma binding protein 5; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: rbbp5, MGC56078, zgc:56078, zgc:85864; retinoblastoma binding protein 5 6.0e-38
Blast2go: retinoblastoma binding protein 5 1.4013e-45
C-terminus
mmc_v1.0_unigene8671 Immune System v1.0 259
FL-Next: E7F0P4 tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: PREDICTED: zinc finger homeobox 3-like n=2 Tax=Danio rerio RepID=UPI0001CF0EC1 1.0e-25
Blast2go: zinc finger homeobox protein 3-like 2.68604e-25
Internal
mmc_v1.0_unigene10543 Immune System v1.0 1056
FL-Next: B5X2L7 tr=Max; Salmo salar (Atlantic salmon). 0.0
AutoFact: Max n=2 Tax=Protacanthopterygii RepID=C1BJU1_OSMMO 2.0e-37
Blast2go: myc associated factor x 5.1968e-39
C-terminus
mmc_v1.0_unigene10757 Immune System v1.0 707
FL-Next: Q4RP47 tr=Chromosome 1 SCAF15008, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
AutoFact: Transcription initiation factor TFIID subunit 7 n=2 Tax=Salmoninae RepID=B5X395_SALSA 0.0
Blast2go: transcription initiation factor tfiid subunit 7 0.0
C-terminus
mmc_v1.0_unigene10793 Immune System v1.0 284
FL-Next: F1QWG8 tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: Nuclear receptor co-repressor n=2 Tax=Danio rerio RepID=A8B6H7_DANRE 9.80909e-45
Blast2go: nuclear receptor corepressor 1 2.52234e-44
Internal
mmc_v1.0_unigene12112 Immune System v1.0 326
FL-Next: Q56R80 tr=E2A-1 transcription factor; Ictalurus punctatus (Channel catfish). 0.0
AutoFact: TCF3, G12; transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47); K09063 transcription factor 3/4/12 3.0e-09
Blast2go: transcription factor e2-alpha 4.84324e-11
Putative N-terminus
mmc_v1.0_unigene12873 Immune System v1.0 1037
FL-Next: E6ZGL6 tr=ATP-dependent DNA helicase 2 subunit 1; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
AutoFact: X-ray repair complementing defective repair in Chinese hamster cells 6 (Ku autoantigen, 70kDa); K10884 ATP-dependent DNA helicase 2 subunit 1 0.0
Blast2go: x-ray repair complementing defective repair in chinese hamster cells 6 0.0
C-terminus
mmc_v1.0_unigene12994 Immune System v1.0 395
FL-Next: Q9I934 tr=Myc associate protein X; Cyprinus carpio (Common carp). 0.0
AutoFact: Max n=2 Tax=Protacanthopterygii RepID=C1BJU1_OSMMO 2.0e-37
Blast2go: myc associated factor x 5.1968e-39
N-terminus
mmc_v1.0_unigene13612 Immune System v1.0 574
FL-Next: E0WEW5 tr=Dlx5a protein; Haplochromis burtoni (Burton's mouthbrooder). 0.0
AutoFact: Dlx5a protein n=3 Tax=Percomorpha RepID=E0WEW5_HAPBU 5.0e-34
Blast2go: distal-less homeobox 5 9.02098e-34
Internal
mmc_v1.0_unigene13706 Immune System v1.0 673
FL-Next: B5X2L6 tr=Zinc finger protein Gfi-1b; Salmo salar (Atlantic salmon). 0.0
AutoFact: PREDICTED: growth factor independent 1-like n=1 Tax=Danio rerio RepID=UPI0001CF1CEC 2.0e-38
Blast2go: zinc finger protein gfi-1b-like 9.46015e-39
Internal
mmc_v1.0_unigene14071 Immune System v1.0 198
FL-Next: E7F2F7 tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: Unassigned protein
Blast2go: histone-lysine n-methyltransferase mll2-like 1.80768e-42
Internal
mmc_v1.0_unigene14365 Immune System v1.0 300
FL-Next: Q6WNS1 tr=Transcription factor Sox6b; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
AutoFact: Transcription factor Sox6b n=2 Tax=Takifugu rubripes RepID=Q6WNS1_TAKRU 0.0
Blast2go: sry (sex determining region y)-box 6-like isoform 2 0.0
Internal

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain