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Assembly Name: Immune System v1.0

Name: RNA splicing, via transesterification reactions

Term: GO:0000375  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
mmc_v1.0_unigene1705 Immune System v1.0 820
FL-Next: C1BIQ1 tr=Thioredoxin-like protein 4A; Osmerus mordax (Rainbow smelt) (Atherina mordax). 0.0
AutoFact: Thioredoxin-like protein 4A n=45 Tax=Coelomata RepID=TXN4A_HUMAN 0.0
Blast2go: thioredoxin-like protein 4a 0.0
Complete
mmc_v1.0_unigene6878 Immune System v1.0 779
FL-Next: C0H9D6 tr=Splicing factor 3A subunit 2; Salmo salar (Atlantic salmon). 0.0
AutoFact: Splicing factor 3A subunit 2 n=1 Tax=Salmo salar RepID=C0H9D6_SALSA 0.0
Blast2go: splicing factor 3a subunit 2 0.0
N-terminus
mmc_v1.0_unigene10118 Immune System v1.0 142
FL-Next: Q5M9N3 tr=Splicing factor, arginine/serine-rich 6b; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: Splicing factor, arginine/serine-rich 6 n=2 Tax=Danio rerio RepID=A8DZG2_DANRE 2.0e-17
Blast2go: splicing arginine serine-rich 6 3.41984e-17
Internal
mmc_v1.0_unigene19737 Immune System v1.0 519
FL-Next: F1QGM7 tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: Splicing factor 3B subunit 1 n=22 Tax=Euteleostomi RepID=SF3B1_HUMAN 0.0
Blast2go: splicing factor 3b subunit 1 0.0
Internal
mmc_v1.0_unigene23269 Immune System v1.0 312
FL-Next: F1QGM7 tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: PREDICTED: similar to splicing factor 3b, subunit 1 isoform 1 isoform 14 n=1 Tax=Canis lupus familiaris RepID=UPI00005A598F 5.0e-18
Blast2go: splicing factor 3b subunit 1 3.0824e-18
Internal
mmc_v1.0_unigene37158 Immune System v1.0 547
FL-Next: B5DG38 tr=Splicing factor 3a subunit 3; Salmo salar (Atlantic salmon). 0.0
AutoFact: Splicing factor 3a subunit 3 n=5 Tax=Euteleostei RepID=B5DG38_SALSA 0.0
Blast2go: splicing factor subunit 3 0.0
Putative Complete
mmc_v1.0_unigene49533 Immune System v1.0 228
AutoFact: Splicing factor 3A subunit 2 n=1 Tax=Salmo salar RepID=C0H9D6_SALSA 0.0
Blast2go: splicing factor 3a subunit 2 0.0
Putative C_terminus
mmc_v1.0_unigene62484 Immune System v1.0 188
FL-Next: Q6DRK2 tr=Splicesome-associated factor 61; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: Splicing factor 3a subunit 3 n=5 Tax=Euteleostei RepID=B5DG38_SALSA 0.0
Blast2go: splicing factor subunit 3 0.0
Internal
mmc_v1.0_unigene73431 Immune System v1.0 192
FL-Next: F1R7P3 tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: PREDICTED: similar to pre-mRNA processing 8 protein, partial n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A153 1.0e-23
Blast2go: pre-mrna-processing-splicing factor 8 1.72184e-24
Internal
mmc_v1.0_unigene78548 Immune System v1.0 403
FL-Next: Q7ZWD6 tr=Prpf8 protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: similar to U5 snRNP-specific protein; K12856 pre-mRNA-processing factor 8 0.0
Blast2go: pre-mrna-processing-splicing factor 8 0.0
Internal

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain