Sustainpine_db
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Assembly Name: SustainPine v3.0

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | Putative Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | More


Search: Containing in

Name Length
SoftwareDescriptionE-value
 FL-next Status Origin of reads
sp_v3.0_unigene181 613
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
 unknown
sp_v3.0_unigene182 2965
• AutoFact
GRAM domain family protein [Arabidopsis thaliana] gb|AEE27386.1| GRAM domain family protein [Arabidopsis thaliana]
 0.0
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
None-
 Complete
sp_v3.0_unigene183 2241
• AutoFact
Os01g0311500 protein (Fragment) n=3 Tax=Oryza sativa RepID=Q0JNA2_ORYSJ
 0.0
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
None-
 Complete
sp_v3.0_unigene184 2539
• AutoFact
Putative auxin response factor 10/16/17 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY1_CYCRU
 0.0
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
Auxin response factor, putative
 2.591e-12
Complete
sp_v3.0_unigene185 660
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
 putative_coding
sp_v3.0_unigene186 2012
• AutoFact
aspartyl aminopeptidase [Arabidopsis thaliana] dbj|BAA97497.1| aspartyl aminopeptidase [Arabidopsis thaliana] gb|AAK73942.1| AT5g60160/f15l12_20 [Arabidopsis thaliana] gb|AAM91365.1| At5g60160/f15l12_20 [Arabidopsis thaliana] gb|AED97287.1| aspartyl amino
 0.0
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
Putative uncharacterized protein
 0.0
Complete
sp_v3.0_unigene187 1196
• AutoFact
oligoribonuclease [Arabidopsis thaliana] dbj|BAH19818.1| AT2G26970 [Arabidopsis thaliana] gb|AEC07913.1| oligoribonuclease [Arabidopsis thaliana]
 0.0
• FL-Next
sp=Oligoribonuclease; Arabidopsis thaliana (Mouse-ear cress).
0.0
• Sma3
Oligoribonuclease
 2.166e-09
Complete
sp_v3.0_unigene188 1388
• AutoFact
putative phosphate/phosphoenolpyruvate translocator protein [Arabidopsis thaliana] sp|Q9SKJ7.1|PT225_ARATH RecName: Full=Probable sugar phosphate/phosphate translocator At2g25520 gb|AAD20711.1| putative phosphate/phosphoenolpyruvate translocator protein [
 0.0
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
Plastidic phosphate translocator-like protein1
 1.721e-10
Complete
sp_v3.0_unigene189 2251
• AutoFact
26S protease regulatory subunit 10B homolog A n=2 Tax=Arabidopsis RepID=PS10A_ARATH
 0.0
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
Putative uncharacterized protein
 0.0
Complete
sp_v3.0_unigene190 1747
• AutoFact
histone deacetylase 15 [Arabidopsis thaliana] gb|AEE76110.1| histone deacetylase 15 [Arabidopsis thaliana]
 0.0
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
Histone deacetylase
 4.049e-14
C-terminus
sp_v3.0_unigene191 3435
• AutoFact
Unassigned protein
 0.0
• FL-Next
tr=Putative uncharacterized protein; Vitis vinifera (Grape).
0.0
• Sma3
None-
 Complete
sp_v3.0_unigene192 935
• AutoFact
putative RNase H [Arabidopsis thaliana]
 4.0e-36
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
Nuclease, putative
 1.879e-07
Putative Complete
sp_v3.0_unigene193 2285
• AutoFact
pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g53700, chloroplastic; AltName: Full=Protein MATERNAL EFFECT EMBRYO ARREST 40; Flags: Precursor emb|CAB
 0.0
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
None-
 C-terminus
sp_v3.0_unigene194 1781
• AutoFact
Translation initiation factor IF-2 (Fragment) n=2 Tax=Vitis vinifera RepID=D7U9V2_VITVI
 0.0
• FL-Next
sp=Translation initiation factor IF-2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress).
0.0
• Sma3
Translation initiation factor IF-2
 3.489e-35
Putative C-terminus
sp_v3.0_unigene195 3806
• AutoFact
RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AAM65738.1| RNA binding protein, putativ
 8.0e-33
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
Glycine-rich RNA-binding protein
 2.597e-27
Complete
sp_v3.0_unigene196 1185
• AutoFact
Prenylated Rab acceptor protein, putative n=1 Tax=Ricinus communis RepID=B9S480_RICCO
 2.00386e-43
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
Putative uncharacterized protein
 0.0
Complete
sp_v3.0_unigene197 4423
• AutoFact
cullin-associated NEDD8-dissociated protein 1 [Arabidopsis thaliana] sp|Q8L5Y6.1|CAND1_ARATH RecName: Full=Cullin-associated NEDD8-dissociated protein 1; AltName: Full=Cullin-associated and neddylation-dissociated protein 1; Short=AtCAND1; AltName: Full=P
 0.0
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
None-
 Complete
sp_v3.0_unigene198 1989
• AutoFact
DUF632 domain containing protein
 0.0
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
BZIP protein
 7.595e-11
C-terminus
sp_v3.0_unigene199 2299
• AutoFact
poly(A)-binding protein [Cucumis sativus]
 0.0
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
Poly(A)-binding protein
 6.971e-34
Complete
sp_v3.0_unigene200 3499
• AutoFact
Myc2 bHLH protein n=2 Tax=Vitis vinifera RepID=A6NAB4_VITVI
 0.0
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
DNA binding protein, putative
 5.157e-06
Complete


Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain