SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene73420

Length: 309 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene73420
CGTCGTGACCTTGGCTGTCACTCAAGATGCAATTGTTCTAACATATGCATGTGAACAACCTATCACACTTGAGCGTCTGTCTTCCTACTGGCTACCAGAGCTTCGTCGTTACCTTGGCTGTGCCAGTCATTGTGGTTGGTTGTAAATTAGATCTGCGAGATGATCAACAACTAAGTTTGGAGCAAGTAATGACACCAATCATGCATCAGTTTCGAGAGATTGAGACATGTATAGAGTGTTCAGCACTGAAGCAGATTCAGGTTGCAGAAGTTTTTTACTATGCTCAAAAAGCAGTTCTTCATCCAACAG

Ace file of the UniGene sp_v1.1_unigene73420

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ATP/GTP/Ca++ binding protein [Cucumis melo]	-	-	2.0e-32	85%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	34%
Blast2go	protein	-	-	1.09741e-34	89%

Source	GOs	Term	Type	e value	Identity
Blast2go	pollen tube growth	GO:0009860	Biological Process	1.09741e-34	89%
Blast2go	embryo development	GO:0009790	Biological Process	1.09741e-34	89%
Blast2go	mitochondrion organization	GO:0007005	Biological Process	1.09741e-34	89%
Blast2go	mitochondrion	GO:0005739	Cellular Component	1.09741e-34	89%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Ras	IPR013753	-	1.09741e-34	89%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5A849

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 23 aas, your sequence is shorter than subject: 48 - 196

Fln protein: VVTLAVTQDAIVLTYACEQPITLERLSSYWLPELRRYLGCASHCGWL*

Protein Length: 49

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAGATGCAATTGTTCTAACATATGCATGTGAACAACCTATCACACTTGAGCGTCTGTCTTCCTACTGGCTACCAGAGCTTCGTCGTTACCTTGGCTGTGCCAGTCATTGTGGTTGGTTGTAAATTAGATCTGCGAGATGATCAACAACTAAGTTTGGAGCAAGTAATGACACCAATCATGCATCAGTTTCGAGAGATTGAGACATGTATAGAGTGTTCAGCACTGAAGCAGATTCAGGTTGCAGAAGTTTTTTACTATGCTCAAAAAGCAGTTCTTCATCCAACAG

Fln Alignment:

sp_v1.1_unigene73420___DAIVLTYACEQPITLERLSSYWLPELRRY
D5A849_______________DVFLLAFSLISKASYENISKKWIPELRHY

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain