SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene59417

Length: 1823 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene59417

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Enolase 1 n=11 Tax=rosids RepID=ENO1_HEVBR	-	-	89%
FL-Next	sp=Enolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	84%
Blast2go	enolase	-	-	92%

Source	GOs	Term	Type	e value	Identity
Blast2go	cell part	GO:0044464	Cellular Component	0.0	92%

Source	InterPros	Term	Type	Identity
Blast2go	Enolase	IPR000941	-	92%
Blast2go	Enolase, C-terminal	IPR020810	-	92%
Blast2go	Enolase, N-terminal	IPR020811	-	92%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LL07

Fln msg: Overlapping hits, possible frame ERROR between 812 and 704,

Fln protein: MATITLVKARSIFDSRGNPTVEVDIHLSDGYLSRAAVPSGASTGVYEALELRDGGKNYMGKGVSKAVENVNKIIGPALIGKDPVDQTGIDNFMVQELDGTQNQWGWCKQKLGANAILAVSLAVCKAGAYVKKIPLYQHIANIAGNKTLVMPVPAFNVINGGSHAGYKLAMQEFMILPVGASSFREAMQMGSEVYHHLKAVIxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGYTGKVVIGMDVAASEFYTEKDQKYDLNFKEENNNGSQKISGSELIKLYESFIEDYPIVSIEDPFDQDDWAHYAQFTVTIGEKVQIVGDDLLVTNPKRVGKAINEKSCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSAAVYAGASFRKPVEPY*

Protein Length: 447

Fln nts: CGTCGTGACCTTGGCTGTCATGGGGGAACGAGGTGTAATTTTCAGTTCAGGAAAACCAATTAGTCTTTGGATATCATCAAGTTAAATCTTCAGAGATC_-_ATGGCAACCATCACATTAGTGAAAGCCAGATCGATTTTTGACAGCCGTGGAAATCCCACTGTCGAGGTCGATATTCATCTTTCTGATGGTTATCTTTCCAGAGCTGCTGTTCCAAGTGGTGCTTCCACTGGTGTGTATGAAGCACTGGAGCTTCGTGATGGAGGGAAGAACTACATGGGAAAGGGTGTTTCAAAGGCTGTTGAAAATGTAAACAAAATTATCGGACCAGCTCTTATTGGCAAGGATCCAGTAGATCAGACTGGAATTGATAACTTCATGGTACAGGAGCTTGATGGAACTCAAAATCAATGGGGCTGGTGCAAACAAAAGCTTGGAGCAAATGCTATATTAGCTGTATCTCTGGCTGTTTGTAAAGCAGGGGCTTATGTTAAGAAGATACCTCTTTATCAGCATATTGCAAACATTGCTGGTAACAAAACTTTGGTGATGCCAGTACCTGCTTTCAATGTCATCAACGGAGGTTCACATGCAGGAtATAAACTGGCAATGCAGGAGTTTATGATTCTACCCGTTGGAGCTTCTTCATTTAGAGAGGCCATGCAGATGGGTTCAGAAGTTTACCACCATCTGAAGGCTGTAATTxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGGCTATACTGGCAAGGTTGTTATTGGCATGGATGTAGCTGCTTCCGAGTTTTACACTGAGAAGGATCAGAAGTATGATTTGAACTTCAAGGAGGAGAATAATAATGGTAGCCAGAAGATATCAGGATCTGAGCTGATCAAGCTCTATGAATCGTTTATTGAGGATTATCCAATCGTATCTATAGAAGACCCATTTGATCAAGATGATTGGGCTCACTATGCACAATTTACGGTCACAATTGGGGAGAAGGTGCAAATTGTGGGGGATGATCTATTAGTGACAAATCCAAAGCGTGTTGGAAAGGCAATCAATGAAAAATCATGCAATGCTCTTTTACTGAAGGTGAACCAAATTGGTTCTGTTACGGAAAGTATTGAAGCAGTAAAAATGTCTAAACGTGCTGGATGGGGAGTGATGACAAGCCATCGCAGTGGTGAAACAGAAGACACCTTTATTGCAGATTTGGCAGTGGGCTTGGCCACGGGCCAAATCAAGACAGGTGCTCCTTGTAGGTCTGAGCGACTTGCTAAGTATAATCAGCTTTTACGAATTGAGGAGGAACTGGGGTCGGCAGCAGTGTATGCAGGCGCAAGTTTCCGCAAGCCCGTGGAGCCGTACTAA___AGAGAAATGTTTTCTCATCTTCGATAATGTTTTTTTGATGTTTAGGATTGTGAGGAAATAAATATGTTTTGGCATCTTCGAGAATGTTTTACTCGATTTTGCTCGGTGAGATCCTTCTAACGGGGATAAATTATATTCTGTATTTTCCCCCCGGTTTCTTTATATGCAAGGGCAGGGGAAAATTTTGGATGCTGAAAATTCCTTTGAAATAAAAAGTAGTATATTTTTTGGCCTAGTATGTGGCACTTTTTCTTGGTAATTTTTGGGGTTGTCCAGATTACATACCAGAGCAGATTGTTATTCTCTGCAAAATGTTTTTGTGAACATTTATAATGAGGGTGCTAGAATGATCAATCAATTAGACTTTTTTTGATGTGTCTTGAAAAAA

Fln Alignment:

sp_v1.1_unigene59417___MATITLVKARSIFDSRGNPTVEVDIHLSDGYLSRAAVPSGASTGVYEALELRDGGKNYMGKGVSKAVENVNKIIGPALIGKDPVDQTGIDNFMVQELDGTQNQWGWCKQKLGANAILAVSLAVCKAGAYVKKIPLYQHIANIAGNKTLVMPVPAFNVINGGSHAGYKLAMQEFMILPVGASSFREAMQMGSEVYHHLKAVIKxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGYTGKVVIGMDVAASEFYTEKDQKYDLNFKEENNNGSQKISGSELIKLYESFIEDYPIVSIEDPFDQDDWAHYAQFTVTIGEKVQIVGDDLLVTNPKRVGKAINEKSCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSAAVYAGASFRKPVEPY
B8LL07_______________MATIKAVKARSIFDSRGNPTVEVDIHLSDGYLSRAAVPSGASTGVYEALELRDGGKDYMGKGVSKAVGNVNKIIGPALIGKDPVDQTGIDNFMVQELDGTQNQWGWCKQKLGANAILAVSLAVCKAGAYVKKIPLYQHIANIAGNKTLVMPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFREAMQMGSEVYHHLKAVIKxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGYTGKVVIGMDVAASEFYTEKDQKYDLNFKEENNNGSQKISGSELIKLYESFIEDYPIVSIEDPFDQDDWAHYAQFTATIGEKVQIVGDDLLVTNPKRVGKAINEKSCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGSAAVYAGASFRQPVEPY

SNPs (tot: 13)

Position	A %	C %	G %	T %	Probability
38	90		10		0.90298
58	92		8		0.999718
59	88	4		8	0.999262
60		8		92	0.999718
62	4		8	88	0.999262
63	92			8	0.999718
65	8			92	0.999718
67		8		92	0.999718
72	92	8			0.999718
74	88		12		1.0
595	66			33	0.997452
1467			14	85	0.993533
1526	83	16			0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain