SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene23117

Length: 1007 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene23117

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	[FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases	-	-	5.0e-27	50%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	92%
Blast2go	bis(5 -adenosyl)-	-	-	0.0	83%

Source	ECs	Term	Type	e value	Identity
Blast2go	Adenylylsulfatase.	EC:3.6.2.1	-	0.0	83%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Sulfur metabolism	00920		0.0	83%
Blast2go	Metabolic pathways	01100		0.0	83%

Source	GOs	Term	Type	e value	Identity
Blast2go	adenylylsulfatase activity	GO:0047627	Molecular Function	0.0	83%
Blast2go	adenosine 5'-monophosphoramidase activity	GO:0043530	Molecular Function	0.0	83%

Source	InterPros	Term	Type	Identity
Blast2go	Histidine triad (HIT) protein	IPR001310	-	83%
Blast2go	Histidine triad-like motif	IPR011146	-	83%
Blast2go	Histidine triad motif	IPR011151	-	83%
Blast2go	Histidine triad, conserved site	IPR019808	-	83%

Full-Lengther Next Prediction

SNPs (tot: 18)

Position	A %	C %	G %	T %	Probability
433		11		88	0.999952
435	87			12	0.999964
436	87	12			0.999964
441	12		87		0.999964
442		12		87	0.999964
444	87			12	0.999964
446	87		12		0.999964
448	88			11	0.999952
451		11		88	0.999937
452	11	88			0.999937
769	77			22	1.0
790		78		21	1.0
843	81			18	1.0
878		80		20	0.999996
884	77			22	0.999999
898	77		22		0.999999
909			22	77	0.999999
948	40		60		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain