SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene21536

Length: 1520 nt

Origin of reads: Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene21536

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Enolase n=3 Tax=Picea sitchensis RepID=B8LL07_PICSI	-	-	94%
FL-Next	sp=Enolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	2-phospho-d-glycerate hydrolase	-	-	89%

Source	InterPros	Term	Type	Identity
Blast2go	Enolase	IPR000941	-	89%
Blast2go	Enolase, conserved site	IPR020809	-	89%
Blast2go	Enolase, C-terminal	IPR020810	-	89%
Blast2go	Enolase, N-terminal	IPR020811	-	89%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LL07

Fln msg: your sequence is shorter than subject: 412 - 445

Fln protein: RRDLGCHSIYLSDGYLSRAAVPSGASTGVYEALELRDGGKNYMGKGVSKAVENVNKIIGPALIGKDPVDQTGIDNFMVQELDGTQNQWGWCKQKLGANAILAVSLAVCKAGAYVKKIPLYQHIANIAGNKTLVMPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFREAMQMGSEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKIAIEKAGYTGKVVIGMDVAASEFYKYDLNFKEENNNGSQKISGSELIKLYESFIEDYPIVSIEDPFDQDDWAHYAQFTATIGEKVQIVGDDLLVTNPKRVGKAINEKSCNALLLKVNQIGSVTESIEAVKMSKRAGWGFIADLAVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSAAVYAGTSFRKPVEPY*

Protein Length: 413

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATTTATCTTTCTGATGGTTATCTTTCCAGAGCTGCTGTTCCAAGTGGTGCTTCCACTGGTGTGTATGAAGCATTGGAGCTTCGTGATGGAGGGAAGAACTATATGGGAAAGGGTGTCTCAAAGGCTGTTGAAAACGTCAATAAAATTATTGGACCAGCTCTTATTGGCAAGGATCCAGTAGATCAGACTGGAATCGATAACTTCATGGTACAGGAGCTTGATGGAACTCAAAATCAATGGGGCTGGTGCAAACAAAAGCTTGGAGCAAACGCTATATTAGCTGTATCTCTTGCAGTTTGTAAAGCAGGGGCTTATGTTAAGAAGATACCTCTTTATCAGCATATTGCAAACATTGCTGGTAACAAAACCTTGGTGATGCCAGTACCTGCTTTCAATGTCATCAATGGAGGTTCACATGCAGGAAATAAACTGGCAATGCAGGAGTTTATGATTCTACCTGTTGGAGCTTCTTCATTTAGAGAGGCCATGCAGATGGGTTCAGAAGTTTACCATCATTTGAAGGCTGTAATTAAGAAGAAGTATGGTCAAGATGCAACAAATGTTGGAGACGAAGGCGGCTTTGCTCCAAACATTCAGGAGAATAAAGAAGGCCTGGAATTATTGAAGATTGCCATTGAGAAAGCTGGCTATACTGGCAAGGTTGTTATTGGCATGGATGTAGCTGCTTCTGAGTTCTACAAGTATGATTTGAACTTCAAGGAGGAGAATAATAATGGTAGCCAGAAGATATCAGGGTCTGAGCTGATCAAGCTTTACGAATCCTTTATTGAGGATTATCCAATTGTATCTATAGAGGACCCATTTGATCAAGATGATTGGGCTCATTATGCACAGTTCACGGCCACAATTGGGGAAAAGGTGCAAATTGTTGGTGATGATCTATTGGTGACAAATCCAAAGCGTGTTGGAAAGGCAATCAATGAAAAATCTTGCAATGCTCTTTTATTGAAGGTGAACCAAATTGGTTCTGTTACAGAAAGCATTGAAGCAGTAAAAATGTCCAAACGTGCTGGATGGGGATTTATTGCAGATCTGGCAGTGGGCTTGGCCACGGGCCAAATCAAGACAGGTGCTCCTTGTAGGTCTGAGCGACTTGCTAAGTATAATCAGCTTTTACGAATTGAGGAGGAACTGGGGTCGGCAGCAGTGTATGCAGGCACAAGTTTCCGCAAGCCTGTAGAACCATACTAA___AGAAAAATGTTTTGGCATGTTCCAGGGTATTTTTGATGTTTAGGATGTGGGGAAATAAATAAGATGTTTTGCCATTTTCGAGAATGTTTCTCTCTGTTTTGTTTGGAGAGATCCTCCGAATGTGATAATTGATATTCTGAAAATTTCTCCCTGTTTCTTTATATGAAGAGGCGGGAAAAATGAATTCAGTAAATGTTGCCGCCGAAGAGGTCTAACATATTAGGTAGTCAATGCTCGAGAAAATTTTGGATGCTTAAAATTCCGGTGAAATAAAATGTGGTATA

Fln Alignment:

sp_v1.1_unigene21536___IYLSDGYLSRAAVPSGASTGVYEALELRDGGKNYMGKGVSKAVENVNKIIGPALIGKDPVDQTGIDNFMVQELDGTQNQWGWCKQKLGANAILAVSLAVCKAGAYVKKIPLYQHIANIAGNKTLVMPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFREAMQMGSEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKIAIEKAGYTGKVVIGMDVAASEFY-----KYDLNFKEENNNGSQKISGSELIKLYESFIEDYPIVSIEDPFDQDDWAHYAQFTATIGEKVQIVGDDLLVTNPKRVGKAINEKSCNALLLKVNQIGSVTESIEAVKMSKRAGWG-------------FIADLAVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSAAVYAGTSFRKPVEPY
B8LL07_______________IHLSDGYLSRAAVPSGASTGVYEALELRDGGKDYMGKGVSKAVGNVNKIIGPALIGKDPVDQTGIDNFMVQELDGTQNQWGWCKQKLGANAILAVSLAVCKAGAYVKKIPLYQHIANIAGNKTLVMPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFREAMQMGSEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKIAIEKAGYTGKVVIGMDVAASEFYTEKDQKYDLNFKEENNNGSQKISGSELIKLYESFIEDYPIVSIEDPFDQDDWAHYAQFTATIGEKVQIVGDDLLVTNPKRVGKAINEKSCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGSAAVYAGASFRQPVEPY

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
88			33	66	0.997452
122	66		33		0.997452
123	33		66		0.997452
160		66		33	0.997452
193		66	33		0.997452
220		33		66	0.997452
295		75		25	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain