SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene20107

Length: 1110 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene20107

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Yae1_N domain containing protein	-	-	2.0e-09	43%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	55%
Blast2go	protein	-	-	1.54674e-39	71%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Essential protein Yae1, N-terminal	IPR019191	-	1.54674e-39	71%

Full-Lengther Next Prediction

SNPs (tot: 27)

Position	A %	C %	G %	T %	Probability
110		66		33	0.997452
112	33	66			0.997452
115	33		66		0.997452
116		66		33	0.997452
117			33	66	0.997452
118			33	66	0.997452
122	66	33			0.997452
128		66		33	0.997452
132		33	66		0.997452
155			33	66	0.997452
165		33		66	1.0
179		33		66	1.0
203	33		66		1.0
220	33		66		1.0
701	85		14		0.993533
710	14		85		0.993533
747		88		11	0.923564
770		11		88	0.923564
841		23	7	69	1.0
855		76		23	1.0
876	23		76		1.0
881	25		75		1.0
915	80		20		0.999996
922	85		14		0.993533
949		85	14		0.993533
962	66		33		0.997452
965		83		16	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain