SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene18935

Length: 802 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene18935

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Ethylene-responsive element binding factor-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZDA4_PICSI	-	-	5.0e-34	52%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	66%
Blast2go	ethylene-responsive element binding factor-like protein	-	-	1.47697e-42	67%

Source	GOs	Term	Type	e value	Identity
Blast2go	regulation of transcription, DNA-dependent	GO:0006355	Biological Process	1.47697e-42	67%
Blast2go	negative regulation of ethylene mediated signaling pathway	GO:0010105	Biological Process	1.47697e-42	67%
Blast2go	transcription repressor activity	GO:0016564	Molecular Function	1.47697e-42	67%
Blast2go	protein binding	GO:0005515	Molecular Function	1.47697e-42	67%
Blast2go	sequence-specific DNA binding transcription factor activity	GO:0003700	Molecular Function	1.47697e-42	67%
Blast2go	nucleus	GO:0005634	Cellular Component	1.47697e-42	67%

Source	InterPros	Term	Type	e value	Identity
Blast2go	AP2/ERF domain	IPR001471	-	1.47697e-42	67%
Blast2go	DNA-binding, integrase-type	IPR016177	-	1.47697e-42	67%

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	G %	T %	Probability
456		64	35	1.0
567	10		90	0.90298
687	14		71	0.984337

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain