SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15411

Length: 767 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene15411 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	H3/H4 histone acetyltransferase	-	-	5.0e-28	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	87%
Blast2go	nmr solution structures of at1g77540	-	-	0.0	77%

Source	ECs	Term	Type	e value	Identity
Blast2go	Histone acetyltransferase.	EC:2.3.1.48	-	0.0	77%

Source	GOs	Term	Type	e value	Identity
Blast2go	histone acetyltransferase activity	GO:0004402	Molecular Function	0.0	77%
Blast2go	peroxisome	GO:0005777	Cellular Component	0.0	77%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Acyl-CoA N-acyltransferase	IPR016181	-	0.0	77%

Full-Lengther Next Prediction

SNPs (tot: 53)

Position	A %	C %	G %	T %	Probability
204	33	66			1.0
372		75		25	0.996473
395		83	16		0.994512
396	16	83			0.994512
397	83		16		0.994512
399		83	16		0.994512
402	16			83	0.994512
403			16	83	0.994512
405		16		83	0.994512
406	16	83			0.994512
407	16	83			0.994512
408		83	16		0.994512
409		83	16		0.994512
413	83	16			0.994512
414		83	16		0.994512
415	16			83	0.994512
492		20		80	0.995493
493		20		80	0.995493
494		16	83		0.994512
495	16	83			0.994512
505	80		20		0.995493
575	80			20	0.995493
577		20	80		0.995493
581	20			80	0.995493
582	20			80	0.995493
584			20	80	0.995493
587	20			80	0.995493
588	80	20			0.995493
590	20			80	0.995493
607	91	8			0.999766
608		8	91		0.999766
609		8	91		0.999766
610	91	8			0.999766
611	4	4	78	13	1.0
646		11	88		0.999952
648		11		88	0.999952
649		11		88	0.999952
650	11		88		0.999952
676			15	84	0.999986
710	75			25	0.996473
711	75		25		0.996473
714	75			25	0.996473
715	75		25		0.996473
716	25			75	0.996473
717		25		75	0.996473
718	25		75		0.996473
721		25	75		0.996473
722	25	75			0.996473
724			25	75	0.996473
726		75		25	0.996473
727		25	75		0.996473
729		25		75	0.996473
732		25		75	0.996473

SSRs (tot: 2)

Start position	End position	Sequence	Length
141	156	TTAT TTAT TTAT TTAT	16
538	553	TCTGC TCTGC TCTGC T	16

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain