SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene15267

Length: 1809 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene15267

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Enolase n=3 Tax=Picea sitchensis RepID=B8LL07_PICSI	-	-	98%
FL-Next	sp=Enolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	98%
Blast2go	enolase	-	-	92%

Source	ECs	Term	Type	e value	Identity
Blast2go	Phosphopyruvate hydratase.	EC:4.2.1.11	-	0.0	92%

Source	KEGGs	Term	Identity
Blast2go	Glycolysis / Gluconeogenesis	00010	92%
Blast2go	Methane metabolism	00680	92%
Blast2go	Biosynthesis of phenylpropanoids	01061	92%
Blast2go	Biosynthesis of terpenoids and steroids	01062	92%
Blast2go	Biosynthesis of alkaloids derived from shikimate pathway	01063	92%
Blast2go	Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid	01064	92%
Blast2go	Biosynthesis of alkaloids derived from histidine and purine	01065	92%
Blast2go	Biosynthesis of alkaloids derived from terpenoid and polyketide	01066	92%
Blast2go	Biosynthesis of plant hormones	01070	92%
Blast2go	Metabolic pathways	01100	92%
Blast2go	Biosynthesis of secondary metabolites	01110	92%

Source	GOs	Term	Type	Identity
Blast2go	glycolysis	GO:0006096	Biological Process	92%
Blast2go	phosphopyruvate hydratase activity	GO:0004634	Molecular Function	92%
Blast2go	magnesium ion binding	GO:0000287	Molecular Function	92%
Blast2go	cell surface	GO:0009986	Cellular Component	92%
Blast2go	phosphopyruvate hydratase complex	GO:0000015	Cellular Component	92%

Source	InterPros	Term	Type	Identity
Blast2go	Enolase	IPR000941	-	92%
Blast2go	Enolase, conserved site	IPR020809	-	92%
Blast2go	Enolase, C-terminal	IPR020810	-	92%
Blast2go	Enolase, N-terminal	IPR020811	-	92%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LL07

Fln msg:

Fln protein: MATIALVKARSIFDSRGNPTVEVDIYLSDGYLSRAAVPSGASTGVYEALELRDGGKDYMGKGVSKAVENVNKIIGPALIGKDPVDQTGIDNFMVQELDGTQNQWGWCKQKLGANAILAVSLAVCKAGAYVKKIPLYQHIANIAGNKTLVMPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFREAMQMGSEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKIAIEKAGYTGKVVIGMDVAASEFYTEKDQKYDLNFKEENNNGSQKISGSELIKLYESFIEDYPIVSIEDPFDQDDWAHYAQFTATIGGKVQIVGDDLLVTNPKRVGKAINEKSCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSAAVYAGTSFRKPVEPY*

Protein Length: 447

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGTGGTTATTTTTTAAGTTCAGGAAATTTTGGCCGTTCATAAACTTTCATCGATCAGTTAGTCTTGACAGATCATCCATTAATCTTCAGAGATC_-_ATGGCAACCATCGCATTAGTGAAAGCCAGGTCGATTTTCGACAGCCGTGGAAATCCTACTGTCGAGGTAGATATTTATCTTTCTGATGGTTATCTCTCCAGAGCTGCTGTTCCAAGTGGTGCTTCCACTGGTGTGTATGAAGCATTGGAGCTTCGTGATGGAGGGAAGGACTATATGGGAAAGGGTGTCTCAAAGGCTGTTGAAAATGTCAATAAAATTATTGGACCAGCTCTTATTGGGAAGGATCCAGTAGATCAGACTGGAATCGATAACTTCATGGTACAGGAGCTTGATGGAACTCAAAATCAATGGGGCTGGTGCAAACAAAAGCTTGGAGCAAACGCTATATTAGCTGTATCTCTTGCAGTTTGTAAAGCAGGGGCTTATGTTAAGAAGATACCTCTTTATCAGCATATTGCAAACATTGCTGGTAACAAAACCTTGGTGATGCCAGTACCTGCTTTCAATGTCATCAATGGAGGTTCACATGCAGGAAATAAACTGGCAATGCAGGAGTTTATGATTCTACCTGTTGGAGCTTCTTCATTTAGAGAGGCCATGCAGATGGGTTCAGAAGTTTACCATCATTTGAAGGCTGTAATTAAGAAGAAGTATGGTCAAGATGCAACAAATGTTGGAGACGAAGGCGGCTTTGCTCCAAACATTCAGGAGAATAAAGAAGGCCTGGAATTATTGAAGATTGCCATTGAGAAAGCTGGCTATACTGGCAAGGTTGTTATTGGCATGGATGTAGCTGCTTCTGAGTTCTACACTGAGAAGGATCAAAAGTATGATTTGAACTTCAAGGAGGAGAATAATAATGGTAGCCAGAAGATATCAGGGTCTGAGCTGATCAAGCTTTACGAATCCTTTATTGAGGATTATCCAATTGTATCTATAGAGGACCCATTTGATCAAGATGATTGGGCTCATTATGCACAGTTCACGGCCACAATTGGGGGAAAGGTGCAAATTGTTGGTGATGATCTATTGGTGACAAATCCAAAGCGTGTTGGAAAGGCAATCAATGAAAAATCTTGCAATGCTCTTTTATTGAAGGTGAACCAAATTGGTTCTGTTACAGAAAGCATTGAAGCAGTAAAAATGTCCAAACGTGCTGGATGGGGAGTGATGACAAGCCATCGCAGTGGTGAAACCGAAGACACTTTTATTGCAGATCTGGCAGTCGGCTTGGCCACGGGCCAAATCAAGACAGGTGCTCCTTGTAGGTCTGAGCGACTTGCTAAATATAACCAGCTCTTACGAATTGAGGAGGAACTGGGGTCGGCAGCAGTGTATGCAGGCACAAGTTTCCGCAAGCCTGTAGAACCATACTAA___AGAAAAATGTTTTGGCATGTTCCAGGGTATTTTTGATGTTTAGGATGTGGGGAAATAAATAAGATGTTTTGCCATTTTCGAGAATGTTTCTCTCTGTTTTGTTTGGAGAGATCCTCCGAATGTGATAATTAATATTCTGAAAGTTTTCCCCTGTTTCTTTATATGAAGAGACGGGGAAAAATGAATTCAGTAAATGTTGCCGCCAAAGAGTTCTAACTTATTAGGTAGTCAATGCTCGAGAAAATTTTGGATGCTTAAAATTCCGGTGAAATAAAATGTGGTATATTTTTTTTTGTCTTAACTATTTATTGAAGTGGCAATTTTTATTGTATCTAAGAGCAGTTTGTATTCAAC

Fln Alignment:

sp_v1.1_unigene15267___MATIALVKARSIFDSRGNPTVEVDIYLSDGYLSRAAVPSGASTGVYEALELRDGGKDYMGKGVSKAVENVNKIIGPALIGKDPVDQTGIDNFMVQELDGTQNQWGWCKQKLGANAILAVSLAVCKAGAYVKKIPLYQHIANIAGNKTLVMPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFREAMQMGSEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKIAIEKAGYTGKVVIGMDVAASEFYTEKDQKYDLNFKEENNNGSQKISGSELIKLYESFIEDYPIVSIEDPFDQDDWAHYAQFTATIGGKVQIVGDDLLVTNPKRVGKAINEKSCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSAAVYAGTSFRKPVEPY
B8LL07_______________MATIKAVKARSIFDSRGNPTVEVDIHLSDGYLSRAAVPSGASTGVYEALELRDGGKDYMGKGVSKAVGNVNKIIGPALIGKDPVDQTGIDNFMVQELDGTQNQWGWCKQKLGANAILAVSLAVCKAGAYVKKIPLYQHIANIAGNKTLVMPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFREAMQMGSEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKIAIEKAGYTGKVVIGMDVAASEFYTEKDQKYDLNFKEENNNGSQKISGSELIKLYESFIEDYPIVSIEDPFDQDDWAHYAQFTATIGEKVQIVGDDLLVTNPKRVGKAINEKSCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGSAAVYAGASFRQPVEPY

SNPs (tot: 35)

Position	A %	C %	G %	T %	Probability
219	97		2		0.962263
416		94	5		0.997984
418		94	5		0.998397
422	94		5		0.998578
429	5		94		0.998578
431	5		85		0.999999
434		2	91	5	0.995912
435		5	88	2	0.988099
436		6		93	0.999153
440	90		6	3	0.997073
441	84	3	3	9	0.999999
442		84	12	3	1.0
443	89	3	6		0.998304
444	89		10		1.0
445	86	3	3	6	0.995852
446	86		3	3	0.995852
449	7	3	3	85	0.996721
450		3	7	89	0.998606
452	3	7	85		0.996721
453	92			7	0.999602
468	91	8			0.999766
476		91	8		0.999766
477	8			91	0.999766
1511		11		88	0.923564
1586	48		51		1.0
1598	50		50		1.0
1602		51		48	1.0
1603		50		50	1.0
1626	42		57		1.0
1660	40		59		1.0
1666			59	40	1.0
1668	18	81			1.0
1673	59			40	1.0
1754		25		75	0.996473
1761		25		75	0.996473

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain