SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene14777

Length: 1324 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene14777

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	ATB2; ATB2; oxidoreductase	-	-	73%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	86%
Blast2go	aldo keto reductase family protein	-	-	87%

Source	GOs	Term	Type	Identity
Blast2go	negative regulation of translation	GO:0017148	Biological Process	87%
Blast2go	response to sucrose stimulus	GO:0009744	Biological Process	87%
Blast2go	regulation of transcription, DNA-dependent	GO:0006355	Biological Process	87%
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	87%
Blast2go	oxidoreductase activity	GO:0016491	Molecular Function	87%
Blast2go	sequence-specific DNA binding transcription factor activity	GO:0003700	Molecular Function	87%
Blast2go	protein heterodimerization activity	GO:0046982	Molecular Function	87%
Blast2go	chloroplast	GO:0009507	Cellular Component	87%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Aldo/keto reductase	IPR001395	-	0.0	87%
Blast2go	NADP-dependent oxidoreductase domain	IPR023210	-	0.0	87%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NK40

Fln msg:

Fln protein: MAQLAAETSAVRRLHLGSQGLEVSAQGLGCMGMSAFYGPPKPDQEMISLVHHAVSRGITFLDTSDVYGPFTNEILIGKAIKGIREKIQLATKFGVSYANGKREIRGDPAYVRAACEASLKRLDVEFIDLYYQHRIDTTVPIEVTMGELKKLVEEGKIKYIGLSEASSSTIRRAHAVHPITAVQIEWSLWSRDIEEEIIPTCRELGIGIVPYSPLGRGFLSAGAKLIENLEDGDFRKFMPRFSKENLEKNKAVFERICEIASKKGCSPSQLALAWVQHQGNDVAPIPGTTKVKNLEENIGALSVELTPLEMKEVEDLVSSAGVFGDRSGDMVLTWMNSETPPLSSWKAAV*

Protein Length: 351

Fln nts: ATGGGGCAGTTAACCATTTATTGCATTCACTCCATAAATACATAGACTCGACAGGTGAAGGGACAATATTTGCTGTGATTTGGAAAACGGGACAGAGTGATCGCATAACAGAGAA_-_ATGGCGCAATTAGCAGCAGAAACATCCGCAGTGCGTAGGTTGCATTTGGGGTCGCAAGGATTAGAAGTGTCAGCGCAGGGGTTGGGTTGCATGGGCATGTCTGCCTTCTATGGCCCCCCAAAGCCTGACCAAGAAATGATATCTCTCGTCCACCATGCTGTCTCCAGAGGCATTACTTTTCTGGACACTTCAGATGTTTATGGCCCTTTTACCAATGAAATCCTCATTGGAAAGGCCATTAAAGGGATCAGGGAGAAAATCCAGTTAGCCACAAAGTTTGGAGTGAGCTATGCAAATGGAAAACGAGAGATTCGAGGGGATCCCGCATATGTTCGTGCAGCCTGCGAGGCAAGCTTGAAGAGACTGGATGTCGAGTTCATTGATCTTTATTATCAACATCGTATTGATACTACAGTGCCCATTGAAGTCACGATGGGAGAACTGAAAAAATTAGTTGAAGAAGGGAAAATAAAATACATTGGACTTTCCGAGGCTTCTTCATCAACGATTCGAAGAGCTCATGCTGTTCATCCTATAACAGCAGTTCAAATAGAGTGGTCCTTGTGGAGTAGGGATATAGAGGAAGAGATTATTCCAACTTGCAGGGAGCTTGGCATTGGAATTGTGCCATATAGCCCTCTAGGGCGGGGATTCCTGTCTGCTGGAGCAAAGTTAATTGAGAATTTAGAAGATGGTGATTTCAGAAAGTTTATGCCAAGGTTTAGTAAAGAGAATCTTGAGAAGAATAAGGCTGTATTTGAGAGGATATGTGAAATAGCTTCAAAGAAGGGGTGCTCCCCCTCCCAACTAGCACTTGCTTGGGTTCAACATCAGGGAAATGATGTTGCACCCATACCAGGGACAACCAAAGTGAAGAACTTAGAAGAAAACATAGGTGCTCTTTCCGTTGAGCTCACACCCTTGGAGATGAAAGAAGTAGAAGATTTGGTGTCCTCAGCTGGTGTCTTTGGAGATCGATCCGGAGATATGGTCTTAACATGGATGAACTCAGAAACACCTCCCCTGTCTTCATGGAAAGCTGCAGTATAA___TGTTTCTTAACACGTGCTTATGAAATCTTTTATGTATGGAGGCATAGCTCTTCTAAGGGATATACCTTTTATCCCTCTTCTCAACAGTAGAGATGCTATGTCTTTCTATCTTAAACATAAATTTATTATTTTCTAATTATCCTCTTTGTTTGAACCTGA

Fln Alignment:

sp_v1.1_unigene14777___MAQLAAETSAVRRLHLGSQGLEVSAQGLGCMGMSAFYGPPKPDQEMISLVHHAVSRGITFLDTSDVYGPFTNEILIGKAIKGIREKIQLATKFGVSYANGKREIRGDPAYVRAACEASLKRLDVEFIDLYYQHRIDTTVPIEVTMGELKKLVEEGKIKYIGLSEASSSTIRRAHAVHPITAVQIEWSLWSRDIEEEIIPTCRELGIGIVPYSPLGRGFLSAGAKLIENLEDGDFRKFMPRFSKENLEKNKAVFERICEIASKKGCSPSQLALAWVQHQGNDVAPIPGTTKVKNLEENIGALSVELTPLEMKEVEDLVSSAGVFGDRSGDMVLTWMNSETPPLSSWKAAV
A9NK40_______________MAKLAA-ASTVRTVRLGSQGLEVSAQGLGCMGMSSFYGPPKPDQEMITLIHHAVSSGITFLDTSDIYGPFTNEVLVGKAIKEIREKVQLATKFGISFADGKREIRGDPAYVRASCEASLKRLDVDCIDLYYQHRIDTRVPIEVTIGEMKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQIEWSLWTRDVEEAIIPTCRELGIGIVPYSPLGRGFLSIGAKLVDNLADNDFRKLMPRFSAENLEKNKVIFERICEIASKKGCSPSQLALAWVHHQGNDVAPIPGTTKVKNLEENIGALSVELTPLETKEIEDLVSSAGVFGDRYGDMDFTWMNSETPPLSSWQATV

SNPs (tot: 12)

Position	A %	C %	G %	T %	Probability
378		83		16	0.999991
852		10		90	0.90298
949		87	12		0.992554
1138		83		16	0.999991
1200	88			11	0.923564
1201	88		11		0.923564
1202	11			88	0.923564
1203	11	88			0.923564
1205			10	90	0.90298
1206			10	90	0.90298
1207	10			90	0.90298
1215			73	26	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain