SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene13038

Length: 636 nt

Origin of reads: Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene13038

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Uracil phosphoribosyltransferase, putative (EC:2.4.2.9 2.7.1.48); K00876 uridine kinase [EC:2.7.1.48]	-	-	9.0e-15	44%
FL-Next	sp=Uridine kinase-like protein 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	56%
Blast2go	protein	-	-	1.77049e-14	65%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring phosphorous-containing groups, Phosphotransferases with an alcohol group as acceptor.	EC:2.7.1.-	-	1.77049e-14	65%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Pentose phosphate pathway	00030		1.77049e-14	65%
Blast2go	Lipopolysaccharide biosynthesis	00540		1.77049e-14	65%
Blast2go	Nicotinate and nicotinamide metabolism	00760		1.77049e-14	65%
Blast2go	Metabolic pathways	01100		1.77049e-14	65%
Blast2go	Uridine kinase.	EC:2.7.1.48	-	1.77049e-14	65%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Pyrimidine metabolism	00240		1.77049e-14	65%
Blast2go	Drug metabolism - other enzymes	00983		1.77049e-14	65%
Blast2go	Metabolic pathways	01100		1.77049e-14	65%
Blast2go	Uracil phosphoribosyltransferase.	EC:2.4.2.9	-	1.77049e-14	65%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Pyrimidine metabolism	00240		1.77049e-14	65%
Blast2go	Metabolic pathways	01100		1.77049e-14	65%

Source	ECs	Term	Type	e value	Identity
AutoFact	Uridine kinase.	EC:2.7.1.48	-	9.0e-15	44%

Source	KEGGs	Term	e value	Identity
AutoFact	Pyrimidine metabolism	00240	9.0e-15	44%
AutoFact	Drug metabolism - other enzymes	00983	9.0e-15	44%
AutoFact	Metabolic pathways	01100	9.0e-15	44%

Source	GOs	Term	Type	e value	Identity
Blast2go	biosynthetic process	GO:0009058	Biological Process	1.77049e-14	65%
Blast2go	nucleoside metabolic process	GO:0009116	Biological Process	1.77049e-14	65%
Blast2go	phosphotransferase activity, alcohol group as acceptor	GO:0016773	Molecular Function	1.77049e-14	65%
Blast2go	uridine kinase activity	GO:0004849	Molecular Function	1.77049e-14	65%
Blast2go	ATP binding	GO:0005524	Molecular Function	1.77049e-14	65%
Blast2go	uracil phosphoribosyltransferase activity	GO:0004845	Molecular Function	1.77049e-14	65%
Blast2go	cytoplasm	GO:0005737	Cellular Component	1.77049e-14	65%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Uridine kinase	IPR000764	-	1.77049e-14	65%
Blast2go	Type II secretion system protein E	IPR001482	-	1.77049e-14	65%

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
214	33		33	33	0.997753
215	33		33	33	0.997753
216		33	66		0.997452
219		66	33		0.997452
346	66		33		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain