SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene11796

Length: 626 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene11796

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	80%
Blast2go	protein	-	-	84%

Source	ECs	Term	Type	e value	Identity
Blast2go	RNA-directed DNA polymerase.	EC:2.7.7.49	-	0.0	84%
Blast2go	Protein-synthesizing GTPase.	EC:3.6.5.3	-	0.0	84%

Source	GOs	Term	Type	Identity
Blast2go	RNA-dependent DNA replication	GO:0006278	Biological Process	84%
Blast2go	intracellular protein transport	GO:0006886	Biological Process	84%
Blast2go	translation	GO:0006412	Biological Process	84%
Blast2go	RNA-directed DNA polymerase activity	GO:0003964	Molecular Function	84%
Blast2go	structural constituent of ribosome	GO:0003735	Molecular Function	84%
Blast2go	RNA binding	GO:0003723	Molecular Function	84%
Blast2go	protein transporter activity	GO:0008565	Molecular Function	84%
Blast2go	ribosome	GO:0005840	Cellular Component	84%
Blast2go	plastid	GO:0009536	Cellular Component	84%
Blast2go	mitochondrion	GO:0005739	Cellular Component	84%

Source	InterPros	Term	Type	Identity
Blast2go	HEAT	IPR000357	-	84%
Blast2go	Armadillo-like helical	IPR011989	-	84%
Blast2go	Armadillo-type fold	IPR016024	-	84%

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
459		83		16	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain