SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene11749

Length: 1116 nt

Origin of reads: Biogeco_1 Biogeco_2 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene11749

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Histidine triad (Hit) protein, putative n=1 Tax=Ricinus communis RepID=B9T5H8_RICCO	-	-	62%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	31%
Blast2go	histidine triad family protein	-	-	74%

Source	ECs	Term	Type	e value	Identity
Blast2go	Adenylylsulfatase.	EC:3.6.2.1	-	0.0	74%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Sulfur metabolism	00920		0.0	74%
Blast2go	Metabolic pathways	01100		0.0	74%

Source	GOs	Term	Type	Identity
Blast2go	sulfur compound metabolic process	GO:0006790	Biological Process	74%
Blast2go	purine ribonucleotide metabolic process	GO:0009150	Biological Process	74%
Blast2go	adenylylsulfatase activity	GO:0047627	Molecular Function	74%
Blast2go	peroxisome	GO:0005777	Cellular Component	74%

Source	InterPros	Term	Type	Identity
Blast2go	Histidine triad (HIT) protein	IPR001310	-	74%
Blast2go	Histidine triad-like motif	IPR011146	-	74%
Blast2go	Histidine triad motif	IPR011151	-	74%
Blast2go	Histidine triad, conserved site	IPR019808	-	74%

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	T %	Probability
561		20	80	0.995493
569		80	20	0.995493
770	25	75		0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain