SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene11215

Length: 919 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene11215

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	similar to pyruvate kinase family protein; K00873 pyruvate kinase [EC:2.7.1.40]	-	-	72%
FL-Next	sp=Pyruvate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	31%
Blast2go	pyruvate kinase	-	-	77%

Source	ECs	Term	Type	e value	Identity
Blast2go		EC:2.7.1.4-	-	0.0	77%

Source	ECs	Term	Type	e value	Identity
AutoFact		EC:2.7.1.4-	-	0.0	72%

Source	GOs	Term	Type	Identity
Blast2go	glycolysis	GO:0006096	Biological Process	77%
Blast2go	pyruvate kinase activity	GO:0004743	Molecular Function	77%
Blast2go	potassium ion binding	GO:0030955	Molecular Function	77%
Blast2go	magnesium ion binding	GO:0000287	Molecular Function	77%

Full-Lengther Next Prediction

SNPs (tot: 10)

Position	A %	C %	G %	T %	Probability
661		16		83	0.994512
663	83			16	0.994512
664	83	16			0.994512
666		83	16		0.994512
667	16	83			0.994512
672		83		16	0.994512
673			16	83	0.994512
675		16		83	0.994512
677			16	83	0.994512
682		14	85		0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain