SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene10855

Length: 1638 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene10855

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Proline iminopeptidase n=2 Tax=Malpighiales RepID=B9GIQ0_POPTR	-	-	72%
FL-Next	sp=Proline iminopeptidase; subsp. trichocarpa).	-	-	77%
Blast2go	proline iminopeptidase	-	-	83%

Source	ECs	Term	Type	e value	Identity
Blast2go	Hydrolases, Acting on peptide bonds (peptide hydrolases), Aminopeptidases.	EC:3.4.11.-	-	0.0	83%

Source	GOs	Term	Type	Identity
Blast2go	proteolysis	GO:0006508	Biological Process	83%
Blast2go	copper ion binding	GO:0005507	Molecular Function	83%
Blast2go	electron carrier activity	GO:0009055	Molecular Function	83%
Blast2go	aminopeptidase activity	GO:0004177	Molecular Function	83%
Blast2go	cytoplasm	GO:0005737	Cellular Component	83%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: tr_plants

Fln subject: B9GIQ0

Fln msg:

Fln protein: MGTNEANMDPNVHVETKDLVNSVDNVNFRREPYPPIEPYSSGFLKVSEIHSLYWEQNGNPDGHPVLFLHGGPGGGTSSGNRRFFDPEFYRIILFDQRGAGKSTPRACLEENTTWDLIDDIEKLRKHLDIEEWQVFGGSWGSTLSLAYTQSHVEHVTGLVLRGIFLLRKKELDWFYEGGLAAIYPDAWESFRDFIPEEERGNFITAYNKRLNSTDAELQNKAAKIWTALEMATSYLLPNKDSLKRGEDDGFSLAFSRIENHYFKHKGFFPTDSFLLDNIDKIRHIPTTIVQGRYDVVCPMMSAWDLHKAWPEAEFKVILDAGHSANEPGITAELVAANERHKELLNKRK*

Protein Length: 350

Fln nts: TGGAACGTGTAGTTTGATTTGTGGGTTTTTGCTGATAATTATCCGTGACATACAGACTGCGATTGGTCTAAAGACAAGTGGCTGCGTGAACAGCTGCAATTACTGAAGTTATTATACAGTGTGCTTGTACAAGAAAGATC_-_ATGGGAACAAATGAAGCAAATATGGATCCGAATGTGCATGTGGAAACGAAGGACCTGGTGAATTCTGTTGACAATGTAAACTTTCGTAGGGAGCCATATCCACCAATTGAACCATACAGCTCAGGATTTTTGAAAGTTTCAGAAATTCACTCATTATATTGGGAGCAGAATGGTAATCCAGATGGACATCCGGTCTTATTTCTTCATGGGGGACCTGGAGGTGGTACAAGTAGTGGTAATAGAAGATTCTTTGATCCAGAATTTTACCGTATCATCCTTTTTGACCAGCGAGGTGCAGGAAAAAGCACACCACGTGCATGCTTAGAGGAGAATACGACATGGGATCTTATAGATGACATTGAGAAACTAAGAAAACATTTGGACATTGAGGAATGGCAGGTGTTTGGTGGTTCATGGGGTAGCACCTTATCCCTAGCATATACGCAGTCACATGTAGAGCATGTCACAGGGCTGGTCCTTCGAGGAATTTTCCTCTTGAGAAAGAAAGAACTAGATTGGTTTTATGAGGGGGGTTTAGCTGCAATATATCCTGATGCTTGGGAATCATTTCGTGATTTCATACCAGAAGAGGAAAGAGGTAACTTTATCACAGCATATAACAAGCGACTGAATAGCACTGATGCAGAACTACAGAATAAAGCTGCAAAAATTTGGACTGCACTTGAAATGGCAACTTCTTATCTTCTTCCCAATAAAGATTCTCTGAAGAGAGGAGAAGATGATGGATTTTCTTTGGCATTTTCTCGAATAGAGAATCATTACTTCAAGCATAAAGGATTCTTTCCTACAGATTCATTTTTGCTTGACAATATAGACAAGATAAGACATATTCCTACCACAATTGTGCAGGGAAGGTATGATGTTGTTTGTCCAATGATGTCTGCATGGGATCTTCACAAAGCATGGCCTGAGGCAGAATTCAAGGTAATTCTTGATGCAGGCCACTCAGCTAATGAACCAGGGATTACAGCAGAACTGGTAGCAGCAAATGAGAGGCACAAAGAATTACTGAATAAGAGGAAGTAA___CCTGCAATGCATTATGGCCCTCACCAAAAGTCATCGGGGTCTTTTTAATAAGTATGTTTTAAGCTTGTTTTACATGCTAGCAGTGCCTGTTCTGAGGAATAATGTTCAGAAAGGTAAATAACGGTATGCCAAAGCCATTTTCTTTGCAAATTTCATTATATGAACAATTGGATGGAGATGATTTATTCTGATCCATCCACTTATCTGTGGCAATATCTATATAAGCAGTAAGAGGAGATAGTAATGAGCAGTACCTGACCAAATCATCCGAAACTATGTACTTCAACTCCATTTTTGCACTCATTTATTTTGCATGCATGTGACCATTTTATCAGAATGATGATTATGCCATGACCCTTATTGAATTTACACTTCCTTGAAATTGTATATGATAATTAATTGAGCCTCACCTTGGGACAAATTGGTTCACTTAACATTGCTTGAATGGTTT

Fln Alignment:

sp_v1.1_unigene10855___DNVNFRREPYPPIEPYSSGFLKVSEIHSLYWEQNGNPDXXXXXXXXXXXXXXXXXXNRRFFDPEFYRIILFDQRGAGKSTPRACLEENTTWDLIDDIEKLRKHLDIEEWQVFGGSWGSTLSLAYTQSHVEHVTGLVLRGIFLLRKKELDWFYEGGLAAIYPDAWESFRDFIPEEERGNFITAYNKRLNSTDAELQNKAAKIWTALEMATSYLLPNKDSLKRGEDDGFSLAFSRIENHYFKHKGFFPTDSFLLDNIDKIRHIPTTIVQGRYDVVCPMMSAWDLHKAWPEAEFKVILDAGHSANEPGITAELVAANERHKELL
B9GIQ0_______________ESVELNRNLYANIEPYETGFLKVSDLHSIYYEQSGSPSGHPVVFLHGGPGGGTAPSNRRFFDPEFYRIILFDQRGAGKSTPHASLEENTTWDLIDDIEKLREHLKIPEWQVFGGSWGSTLALAYSQSHPEKVTGLVLRGIFLLRKKEIDWFYEGGAAAIFPDAWESFRDFIPENERGCFIDAYSKRLNSDDLETQYAAARAWTKWEMMTAHLLPNEETVKRGDDDIFSLAFARIENHYFVNKGFFPSDSFLLENVDKIRHINTTIVQGRYDVCCPMMSAWDLHKAWPEADLKVVPDAGHSANEPGITAELVAANEKLKNII

SNPs (tot: 13)

Position	A %	C %	G %	T %	Probability
207			75	25	0.996473
566		66		33	1.0
834	90			10	0.90298
856	80	20			0.999996
1248		75		25	0.996473
1422	88		11		0.923564
1424	88		11		0.923564
1547		75		25	1.0
1566		22	77		0.999999
1608	80		20		0.995493
1609		20	80		0.995493
1622		25		75	0.996473
1626	25	75			0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain