SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
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miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene10110

Length: 851 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene10110

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	60%
Blast2go	dna binding protein gt-1	-	-	4.44786e-40	76%

Source	GOs	Term	Type	e value	Identity
Blast2go	regulation of cellular transcription, DNA-dependent	GO:0045449	Biological Process	4.44786e-40	76%
Blast2go	sequence-specific DNA binding transcription factor activity	GO:0003700	Molecular Function	4.44786e-40	76%
Blast2go	nucleus	GO:0005634	Cellular Component	4.44786e-40	76%

Full-Lengther Next Prediction

SNPs (tot: 19)

Position	A %	C %	G %	T %	Probability
377	11			88	0.923564
379	88		11		0.923564
431		87		12	0.992554
435		71	28		1.0
437			33	66	1.0
438	33	66			1.0
439	66	33			1.0
440		33	66		1.0
442	66			33	1.0
443	66		33		1.0
444	66		33		1.0
448			33	66	1.0
450		33		66	1.0
451	33			66	1.0
452	66	33			1.0
492	10		90		0.90298
536		10		90	0.90298
655	16		83		0.994512
661		16		83	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain