SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene7827

Length: 1164 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene7827

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Med25_VWA domain containing protein	-	-	3.0e-30	33%
FL-Next	tr=Phytochrome and flowering time protein 1; Triticum aestivum (Wheat).	-	-	0.0	66%
Blast2go	phytochrome and flowering time protein 1	-	-	0.0	57%

Source	GOs	Term	Type	Identity
Blast2go	red, far-red light phototransduction	GO:0009585	Biological Process	57%
Blast2go	response to red light	GO:0010114	Biological Process	57%
Blast2go	jasmonic acid mediated signaling pathway	GO:0009867	Biological Process	57%
Blast2go	regulation of flower development	GO:0009909	Biological Process	57%
Blast2go	positive regulation of defense response	GO:0031349	Biological Process	57%
Blast2go	response to far red light	GO:0010218	Biological Process	57%
Blast2go	defense response to fungus	GO:0050832	Biological Process	57%
Blast2go	positive regulation of cellular transcription, DNA-dependent	GO:0045941	Biological Process	57%
Blast2go	mediator complex	GO:0016592	Cellular Component	57%

Full-Lengther Next Prediction

SNPs (tot: 19)

Position	A %	C %	G %	T %	Probability
571	33			66	0.997452
578	33	66			0.997452
632		25	75		0.996473
747		14		85	0.993533
749		85		14	0.993533
751	85		14		0.993533
752	85			14	0.993533
754	14		85		0.993533
756	85	14			0.993533
757		28		71	1.0
759			16	83	0.994512
761		16	16		0.988813
762		83		16	0.994512
766		16	83		0.994512
771	16			83	0.994512
1035			66	33	0.997452
1036	66			33	0.997452
1051		33	66		0.997452
1053			33	66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain