SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene5755

Length: 856 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene5755

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Ethylene-responsive element binding factor-like protein n=5 Tax=Picea sitchensis RepID=E0ZGY9_PICSI	-	-	75%
FL-Next	tr=Ethylene-responsive element binding factor-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	82%
Blast2go	ethylene-responsive element binding factor-like protein	-	-	67%

Source	GOs	Term	Type	Identity
Blast2go	response to hormone stimulus	GO:0009725	Biological Process	67%
Blast2go	regulation of transcription, DNA-dependent	GO:0006355	Biological Process	67%
Blast2go	transcription repressor activity	GO:0016564	Molecular Function	67%
Blast2go	protein binding	GO:0005515	Molecular Function	67%

Full-Lengther Next Prediction

SNPs (tot: 42)

Position	A %	C %	G %	T %	Probability
133			83	16	0.994512
152		16	83		0.994512
194	83			16	0.994512
382	66		33		0.997452
388		33	66		0.997452
391	66	33			0.997452
461		16		83	0.994512
462	83		16		0.994512
466	83		16		0.994512
467		83		16	0.994512
471		16	83		0.994512
472	83			16	0.994512
474	83		16		0.994512
478		83		16	0.994512
480	16		83		0.994512
482		83		16	0.994512
483		83	16		0.994512
484	16			83	0.994512
489	66	33			1.0
491		66		33	1.0
492	66	33			1.0
496	33		66		1.0
498		33	66		1.0
499			66	33	1.0
500		66		33	1.0
503	66	33			1.0
504		66		33	1.0
508	33		66		1.0
512	33		66		1.0
515	11			88	0.923564
516		88		11	0.923564
551			10	90	0.90298
556	10			90	0.90298
557		10		90	0.90298
559		90		10	0.90298
560	90			10	0.90298
561	90		10		0.90298
564	90			10	0.90298
565	90		10		0.90298
566			90	10	0.90298
567	90	10			0.90298
861		25	75		0.996473

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain