SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene2608

Length: 860 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene2608

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	ATP binding protein, putative (EC:1.3.1.74)	-	-	74%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	95%
Blast2go	atp binding	-	-	84%

Source	GOs	Term	Type	e value	Identity
Blast2go	kinase activity	GO:0016301	Molecular Function	0.0	84%
Blast2go	plasma membrane	GO:0005886	Cellular Component	0.0	84%

Source	InterPros	Term	Type	Identity
Blast2go	Protein kinase, catalytic domain	IPR000719	-	84%
Blast2go	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	84%
Blast2go	Tyrosine-protein kinase, active site	IPR008266	-	84%
Blast2go	Protein kinase-like domain	IPR011009	-	84%
Blast2go	Serine/threonine-protein kinase-like domain	IPR017442	-	84%
Blast2go	Tyrosine-protein kinase, catalytic domain	IPR020635	-	84%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LRM4

Fln msg: your sequence is shorter than subject: 262 - 907

Fln protein: FAVRKLKSVVTLAVTLHQNKMIRELEKLAKLCHDNVMRPVGFVIYDDVALLLHYHLPNGTLAQLLHREDGTSEFEPDWPRRLSIALGVAEGLAFLHHCHTPIIHLDIASANIFLDANFNPLIGEVEISKLLDPSKGTTSITAVAGSFGYIPPEYAYTMQVTAAGNVYSFGVILLETLTSRFPVEEAFGEGMDLVKWVQNASSRKETPEQILDAKLSTVSFAWRQQMLAALKVALLCTDNTPAKRPKMKKVVEMLQEVNQGA*

Protein Length: 263

Fln nts: TGTTTGCTGTAAGGAAGCTTAAATCCGTCGTGACCTTGGCTGTCACTCTTCACCAGAATAAGATGATTAGGGAGCTGGAGAAGCTGGCCAAGCTTTGTCATGACAATGTGATGAGGCCAGTTGGCTTTGTCATTTACGATGATGTGGCATTGTTATTACATTACCACCTGCCGAATGGAACCCTTGCCCAGCTATTGCACAGAGAAGATGGTACTTCCGAGTTTGAGCCAGACTGGCCAAGGCGTTTGTCAATAGCATTGGGAGTGGCTGAAGGATTGGCTTTTCTTCATCACTGCCACACACCAATCATCCATCTGGATATTGCTTCTGCCAACATATTTCTGGATGCCAACTTTAATCCACTGATAGGTGAGGTAGAGATTTCAAAGCTGTTGGATCCATCTAAAGGCACTACAAGCATCACTGCCGTTGCAGGTTCCTTTGGATACATACCTCCCGAGTATGCATATACCATGCAAGTGACAGCAGCTGGCAATGTCTATAGCTTTGGAGTGATCTTGCTTGAAACTCTCACTAGCCGGTTCCCAGTAGAGGAAGCCTTCGGTGAGGGAATGGATTTGGTGAAATGGGTTCAGAATGCATCTTCCAGAAAAGAGACTCCTGAACAGATTCTTGATGCTAAGTTGAGCACAGTGTCCTTTGCTTGGAGACAGCAAATGCTTGCAGCACTCAAAGTGGCCTTGCTTTGCACCGACAACACACCAGCCAAAAGACCCAAAATGAAAAAGGTGGTTGAGATGCTTCAAGAAGTAAATCAAGGTGCATGA___TGAATTAATTAGCTGCAATTTTGCCCCTATACAATATCCCTTTCTTTCTTGACATTCTGGTCACTTTTCCCT

Fln Alignment:

sp_v1.1_unigene2608___FAVRKLKSVVTLAVTLHQNKMIRELEKLAKLCHDNVMRPVGFVIYDDVALLLHYHLPNGTLAQLLHREDGTSEFEPDWPRRLSIALGVAEGLAFLHHCHTPIIHLDIASANIFLDANFNPLIGEVEISKLLDPSKGTTSITAVAGSFGYIPPEYAYTMQVTAAGNVYSFGVILLETLTSRFPVEEAFGEGMDLVKWVQNASSRKETPEQILDAKLSTVSFAWRQQMLAALKVALLCTDNTPAKRPKMKKVVEMLQEVNQGA
B8LRM4______________FAVRKLKSI-DRTVSLHQNKMIRELEKLAKLSHENVMRPVGFVIYDDVALLLHYHLPNGTLAQLLHREGGTSEFEPDWPRRLSIALGVAEGLAFLHHCHTPIIHLDIASANIFLDANFNPLIGEVEISKLLDPSKGTTSITAVAGSFGYIPPEYAYTMQVTAAGNVYSFGVILLETLTSRLPVEEAFGEGMDLVKWVHNASSRKETPEQILDAKLSTVSFAWRQQMLAALKVALLCTDNTPAKRPKMKKVVEMLQEVNQGA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain